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H2-18-all-fractions_k255_31426_14

Organism: H2-18-all-fractions_metab_63

partial RP 28 / 55 MC: 3 BSCG 30 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: comp(16095..17555)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor n=1 Tax=Massilia timonae CCUG 45783 RepID=K9E436_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 86.1
  • Coverage: 495.0
  • Bit_score: 819
  • Evalue 1.10e-234
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.6
  • Coverage: 493.0
  • Bit_score: 823
  • Evalue 1.40e-235
rpoN; RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 78.5
  • Coverage: 497.0
  • Bit_score: 767
  • Evalue 1.40e-219

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Taxonomy

Massilia sp. LC238 → Massilia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1461
ATGAAACAGACACTGCAACTACGGACTTCGCAGCACCTTGCGCTCACCCCGCAACTACAGCAGTCGATCCGCCTGCTGCAGTTGTCGACCCTCGAGCTGCACCAGGAGCTCGAGCAGATCCTGTCCGATAACCCGCTGCTCGAGCGCCTCGACGATCCGCTCGACCACTCGGTGCGCCTGCTGGCCGACGGCGCGATCAATAACGCGCCGGCGCAGGGCGAGGCGCCGCCGCAGCCGGGCGCCGAGCAGGCCAGCCCGCCCGAACCCGAGGGCGCGGACGCCGGCGAGGGCGGCGGGCTCGATGCCGACGCCGACTGGGGCGAGGCCGCGGGCCCGCGCAGCGGCGACGACGAGGACGGCCGCCCGCAGCTGGAGGCCGGCGCGATCACCTTGCGCGAGCACCTGATGGAGCAGGTGCGCCTGACTGCGCTGTCGGCGCGCGACCGCGCGCTGGCCGAGCTGGTGGTCGATGCGCTCGACGACAACGGCTACCTCGAAGAGCCGCTCGACGACATCCTCGCGCGGCTGCCGGTCGAACTCGATGTCGAACTGGACGAACTGCGCACCGCGCTGTCGCTGGTGCAAAGCCTGGACCCGGTCGGGGTGGGCGCACGCAGCGCCGCCGAATGCCTGGCGCTGCAGATCCGCCGCATGCCGCGTGTGCCGATGGTGACGCGGCGCTTGGCGCTCAAGATCGTCGAGGGTTACCTGAGCTGGTTCGCGCAGCGCGACTTCAACAAACTGAAAAAAGCGCTCGACTGCGACGACGAAGACCTGCGTGAAGCGCAGGCCGTGATCCGCCAATGCAATCCGCATCCCGGCGCCGCGTTCGCGTCGAACGCTTCCGATTATGTGGTGCCCGATGTGATCGTGCGCCATACCAAAGCCGGTTGGACGGTGACACTGAACCACGAAGTCATGCCGCGCCTGCGCGTGAACTCGCTGTATGCAGCCTTGCTCAAGCAGGGCAAGAGCGAAAGCCAGATGAGTGCCCAGCTGCAGGAGGCGAAGTGGCTCATCAAAAATATGCGGCAGCGCTTCGACACCATCCTGCGCGTTGCCCAAGCCATTGTCGATCGCCAGCGCAACTTTTTTTCGCACGGCGCGGTTGCCATGCGGCCCCTTGTTTTGCGCGAGATTGCTGATACACTAGGACTACACGAGAGCACAATTTCTCGGGTCACAACCCAGAAATATATGCTGACCCCGCACGGCATGTTCGAGTTGAAGTATTTCTTCGGAAGCCACGTCGCCACCGAAGCGGGGGGAGAAGCCTCCTCGACGGCGATCCGGGCTCTAATTGCGCAACTGACAGGAGCAGAAGACCCTAAGAACCCTTTATCCGACAGCAAGATCGCGGAGATGCTCGGGGAACAAGGAATGGTCATTGCGCGCCGCACGGTCGCGAAGTACCGCGAAGCGCTCAAGATACCGCCGGTCAGCCTCCGCAAAGCCTTGTAA
PROTEIN sequence
Length: 487
MKQTLQLRTSQHLALTPQLQQSIRLLQLSTLELHQELEQILSDNPLLERLDDPLDHSVRLLADGAINNAPAQGEAPPQPGAEQASPPEPEGADAGEGGGLDADADWGEAAGPRSGDDEDGRPQLEAGAITLREHLMEQVRLTALSARDRALAELVVDALDDNGYLEEPLDDILARLPVELDVELDELRTALSLVQSLDPVGVGARSAAECLALQIRRMPRVPMVTRRLALKIVEGYLSWFAQRDFNKLKKALDCDDEDLREAQAVIRQCNPHPGAAFASNASDYVVPDVIVRHTKAGWTVTLNHEVMPRLRVNSLYAALLKQGKSESQMSAQLQEAKWLIKNMRQRFDTILRVAQAIVDRQRNFFSHGAVAMRPLVLREIADTLGLHESTISRVTTQKYMLTPHGMFELKYFFGSHVATEAGGEASSTAIRALIAQLTGAEDPKNPLSDSKIAEMLGEQGMVIARRTVAKYREALKIPPVSLRKAL*