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H2-18-all-fractions_k255_3940250_11

Organism: H2-18-all-fractions_metab_63

partial RP 28 / 55 MC: 3 BSCG 30 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: comp(8676..9311)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoE n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00037A2238 similarity UNIREF
DB: UNIREF100
  • Identity: 96.3
  • Coverage: 191.0
  • Bit_score: 358
  • Evalue 3.90e-96
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 200.0
  • Bit_score: 374
  • Evalue 9.60e-101
rpoE; RNA polymerase sigma factor RpoE similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 199.0
  • Bit_score: 344
  • Evalue 2.10e-92

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Taxonomy

Massilia sp. JS1662 → Massilia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 636
ATGGACGCCGCTGCAGCCAATGGGACATGGTCAGTGACGACAGAACGCGAGTGTGATCAACTGTTGGTTGAGCGCGTCCAGGCCGGCGACCGGCAGGCGTTCGACCTGCTGGTAGCCAAGTACCAGCGCAGGCTGATGCGGCTGGTGTCGCGCCTCGTGCACGACCCGGCGGAAGCGGAAGACGTGGTGCAGGAAACGTTTATCAAAGCGTACCGTGCATTGCGCCATTTCCGGGGCGAGTCTGCGTTCTATACTTGGTTGTACAGAATCGGTATTAACACGGCAAAGAATTTTCTCGTCACGCAGGGCAGGCGCGCCCCGACCTCGACCGAGGCCGATGCAGAGCGGGCCGAAGCGTTTGACGATGCGGATAGCTTGCGCGACATCAACACCCCGGAAAGCGTGTTGGCCAGCAAGCAAATCGCTTATACGGTCAATGCCGCGATGGAGGCGCTGCCGCTGGAACTGCGGACGGCGATTGTCCTTCGCGAAATTGAAGGATTGAGCTACGAGGAAATCTCCGAAGTGATGGCTTGCCCGATTGGTACAGTGCGCAGCAGGATATTCCGGGCCCGCGAAGTCATCGCCGACAAATTGCGACCGCTGCTGGATTTGCCGGTCGACAAACGTCGGTAG
PROTEIN sequence
Length: 212
MDAAAANGTWSVTTERECDQLLVERVQAGDRQAFDLLVAKYQRRLMRLVSRLVHDPAEAEDVVQETFIKAYRALRHFRGESAFYTWLYRIGINTAKNFLVTQGRRAPTSTEADAERAEAFDDADSLRDINTPESVLASKQIAYTVNAAMEALPLELRTAIVLREIEGLSYEEISEVMACPIGTVRSRIFRAREVIADKLRPLLDLPVDKRR*