ggKbase home page

H2-18-all-fractions_k255_3949177_18

Organism: H2-18-all-fractions_metab_63

partial RP 28 / 55 MC: 3 BSCG 30 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: comp(21716..22360)

Top 3 Functional Annotations

Value Algorithm Source
Transcription regulator protein n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0FZM8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 42.9
  • Coverage: 212.0
  • Bit_score: 159
  • Evalue 2.10e-36
TetR family transcriptional regulator {ECO:0000313|EMBL:KIF81784.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.8
  • Coverage: 210.0
  • Bit_score: 165
  • Evalue 6.80e-38
acrR; transcription regulator protein similarity KEGG
DB: KEGG
  • Identity: 42.4
  • Coverage: 210.0
  • Bit_score: 157
  • Evalue 2.90e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Herbaspirillum sp. TSA66 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 645
ATGGTGCGGAGAACAAAAGAACAGGCGCTCGAGACGCGCAACAAAATACTTGCTGCGGCAACGGCGATATTCGACAGGCGTAGTTGGAAGGAGGTCAATCTCGAAGACGTGGCCGCCGCAGCCGGGGTGACGCGTGGTGCCATCTATTGGCATTTCGGTGGCAAGGACGAGCTGTTCGATGCCGTTTGCGATGCGACTCCCTTGCCGTCGGAGCTGATCGGGGAGGAACTTGCGCTTGCCCTGGGACCGGATCCGCTGGGGAAATTCAGGGAAGCTTGCCTGTCCGCACTGATGAGCGCGGCCGGGGCGCCAGGGCGGGCTACGCTCTACAGCAAGCCGTCTACCAAGGAAGAACTGCTGGATCCCGGCGGCGTCCTGCTGCTGCGTCACCGCATCCCGGCCGCAAATTGCAAGCGTTCGGTGCAGATGGTCCTGCGATCGGCGATCGAGCAGGGACAGTTGCCGGTCTCCCTGGATATTGAACCCGCGGCGAGATACTTGCACGGGACGTTGACAGGATTGCTCAGCACCTGGCTGCTTGCGCCCTCAAGCTTCGACTTGATATCGGAGGCAGGCAATGCGCTCGATGCTGTCTTCCTCGGGCTTCGATCGGCGCCGTCCCTGCAGAAGGTCCAGGTCAGGTAA
PROTEIN sequence
Length: 215
MVRRTKEQALETRNKILAAATAIFDRRSWKEVNLEDVAAAAGVTRGAIYWHFGGKDELFDAVCDATPLPSELIGEELALALGPDPLGKFREACLSALMSAAGAPGRATLYSKPSTKEELLDPGGVLLLRHRIPAANCKRSVQMVLRSAIEQGQLPVSLDIEPAARYLHGTLTGLLSTWLLAPSSFDLISEAGNALDAVFLGLRSAPSLQKVQVR*