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H2-18-all-fractions_k255_5231533_35

Organism: H2-18-all-fractions_metab_63

partial RP 28 / 55 MC: 3 BSCG 30 / 51 MC: 6 ASCG 14 / 38 MC: 4
Location: comp(48046..48867)

Top 3 Functional Annotations

Value Algorithm Source
Flagellar biosynthesis pathway, component FliR n=1 Tax=Variovorax sp. CF313 RepID=J2JWH5_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 49.6
  • Coverage: 256.0
  • Bit_score: 263
  • Evalue 2.20e-67
Flagellar biosynthesis pathway, component FliR {ECO:0000313|EMBL:EJL72205.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.6
  • Coverage: 256.0
  • Bit_score: 263
  • Evalue 3.10e-67
type III secretion system inner membrane R protein similarity KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 243.0
  • Bit_score: 240
  • Evalue 4.30e-61

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 822
ATGTCGCCCTTGTTTCAAGAGTGGATATCTCAGCCTGTCGTGCTGGCCGCGTTCTTCATATCGGTGAGGCTAGCCGCGCTCCTGTTGTTGACGCCCGCGCTTTCCCCCTCACAGGTTCCGCCATCTGTTCGCGTACTCCTGGTGCTCGGGCTGTCGGCTAACCTGGCACTCGGTTTTGCCTTCAGCCAAAGCGACATGCCCACAGTAATGCCAACCGATCAGGCTGGCATTGCCATGGCAGTACTTACCGAGGCTGCGCTCGGTGCGGTCATGGCCCTATCGGTGCAGCTCGCCTTTGGCGCGTTCTCCCTTGCGGCGGCTTTGCTGGACCTGCAAATCGGCTTCGGCATGGCGGCGGTGTTCGACCCAGTTACGAGGCGACAACTGCCCATCGTTACGACAGCGATGAACCTCGTCGCGGCCATGGTTTTTTTATTGGTGAACGGGCACCACGCTCTTCTGCGCGGCGTCGCCTTCAGTCTCGAGCATTTCCCCCCCGGCCACCCTTGGGCGGTCGAGCCGGTTTACGGGGTGCTGATGAAGAAAGTTGCTTCCCTGTTCGGCTTGGGTTTTTCGTTGGCCGCGCCGGTTGCCTGTTGCCTACTTTTCGTTGAGTTCACGCTCGGGGTCATCTCCCGCAATCTCCCACAGATGAACATTTTTGTGGTCGGTATCCCCGCGAAGATTGTCGCGGGCATGATCGCGCTGGCTGTCTGGTATGGCGGTGCAGGGGTGTTCATGGCGCGGATATATCAGTCCATCTATTCAGGATGGGATGAGATGTTTGGCGTCGCCAAGCTGCGGAGCAATGATGGCTGGTGA
PROTEIN sequence
Length: 274
MSPLFQEWISQPVVLAAFFISVRLAALLLLTPALSPSQVPPSVRVLLVLGLSANLALGFAFSQSDMPTVMPTDQAGIAMAVLTEAALGAVMALSVQLAFGAFSLAAALLDLQIGFGMAAVFDPVTRRQLPIVTTAMNLVAAMVFLLVNGHHALLRGVAFSLEHFPPGHPWAVEPVYGVLMKKVASLFGLGFSLAAPVACCLLFVEFTLGVISRNLPQMNIFVVGIPAKIVAGMIALAVWYGGAGVFMARIYQSIYSGWDEMFGVAKLRSNDGW*