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H2-18-all-fractions_k255_966030_5

Organism: H2-18-all-fractions_metab_conc_87

near complete RP 47 / 55 BSCG 49 / 51 MC: 3 ASCG 14 / 38
Location: comp(3043..4071)

Top 3 Functional Annotations

Value Algorithm Source
Putative sigma factor includes region 2 n=1 Tax=Patulibacter medicamentivorans RepID=H0E1C9_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 57.9
  • Coverage: 347.0
  • Bit_score: 384
  • Evalue 6.30e-104
Putative sigma factor includes region 2 {ECO:0000313|EMBL:EHN12568.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.9
  • Coverage: 347.0
  • Bit_score: 384
  • Evalue 8.80e-104
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 55.6
  • Coverage: 340.0
  • Bit_score: 345
  • Evalue 9.10e-93

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Taxonomy

Patulibacter medicamentivorans → Patulibacter → Solirubrobacterales → Thermoleophilia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1029
ATGGGTTCCAGCCGCGAAAGAGAGCTGCTCGAGGCCGCGCGGGGCGGCGACGAGACCGCCTTCGAAAAGCTGATCCAGCCATACCGCGGCGAGCTGCAGGCCCACGCCTACCGGATGCTCGGCTCGCTCCAGGACGCCGAGGACGCGATGCAGGACGCGCTCCTGCGCGCCTGGCGCGGGCTGGCCCGCTTCGAGGGCCGCAGCTCGCTTCGCTCCTGGCTCTACCGGATCGTCACGAACAGCTCCCTCAGGCTGATCGAGCGCCGGCCGGCGCGGATCCTCCCGATCGACCTCGGGCCCCCGGCCGACCCGCACGAGGGGGGAGGCACACCGCTGACCGAGTCGGTCTGGCTCGAGCCCTTCCCGGACGGGCAGCTCGCGCTCGAGGACGGACCATTCTCGCCCGAGGCGCGCTACGAGCAGCGCGAGAGCGTCGAGCTGGCCTTCACGGCCGCCCTCCAGCACCTTCCTCCGCTCCAGCGGGCGGCCTTGATCCTCACCGATGTGCTCGGCTTCGCGCCCGGCGAGGTCGCCGAGATGCTGGACGCCTCGCCCGCCTCGATCTACAGCGCGCTCCAGCGGGCCCGCAAGGCGGCGGAGGAGCGCCTACCGGAGCAGAGCCAGCAGCAGACCCTGCGCTCGCTCGGGGACGAGCGCCTCCGCGAGCTGGTCGACCGCTTCGTCGAGGCCTGGGAGGGCGGCGACGTCGACGCCATCCGCTCGATGCTCACCCAGGACGCCGTCCTCGCCATGCCCCCGTGGCCCAACTGGTTCCGCGGCCGCGAGGAGGTCGCCGACTTCCTCGCACAGGGGCCCCTGACGCCCGGCCGCCGCTGGAACCTGACGCCGACGCGCGCCAGCGGTCAGCCGGCGCTCGCCTCGTATTTCGGCGACAGCCCGCGGGCCGGCAGGGCGGAGGGGCTGATCGTGCTCACCCTCACCGAGGACGGCCGGCTCAGCCAGCTCACCGCCTTCCGGGAGCCGGGGCTCTTTCCCAGCTTCGGTCTCCCGAGGGCGATGGATTCGTAG
PROTEIN sequence
Length: 343
MGSSRERELLEAARGGDETAFEKLIQPYRGELQAHAYRMLGSLQDAEDAMQDALLRAWRGLARFEGRSSLRSWLYRIVTNSSLRLIERRPARILPIDLGPPADPHEGGGTPLTESVWLEPFPDGQLALEDGPFSPEARYEQRESVELAFTAALQHLPPLQRAALILTDVLGFAPGEVAEMLDASPASIYSALQRARKAAEERLPEQSQQQTLRSLGDERLRELVDRFVEAWEGGDVDAIRSMLTQDAVLAMPPWPNWFRGREEVADFLAQGPLTPGRRWNLTPTRASGQPALASYFGDSPRAGRAEGLIVLTLTEDGRLSQLTAFREPGLFPSFGLPRAMDS*