ggKbase home page

H3-16-all-fractions_k255_2209355_14

Organism: H3-16-all-fractions_metab_44

near complete RP 51 / 55 MC: 2 BSCG 49 / 51 MC: 4 ASCG 14 / 38
Location: 10609..11307

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=RL1_CYTH3 similarity UNIREF
DB: UNIREF100
  • Identity: 78.4
  • Coverage: 232.0
  • Bit_score: 378
  • Evalue 4.00e-102
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.2
  • Coverage: 232.0
  • Bit_score: 390
  • Evalue 1.10e-105
rplA; 50S ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 78.4
  • Coverage: 232.0
  • Bit_score: 378
  • Evalue 1.10e-102

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sporocytophaga myxococcoides → Sporocytophaga → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 699
ATGGCAAAATTAACAAAAAATCAAAAGGCGGTTCAGGCCAAATTCAATGCAGAGAAAGAATACTCTCTGACCGATGCAGCCAAGCTAGTAAAGGAAATTACTTTCACCAAGTTTGATGCAACCGTAGATCTGGATGTCAGATTAGGCGTTGATCCGAAGAAATCAGACCAGATGGTCCGTGGCATTGTTGCCCTTCCTCACGGAACAGGTAAAAATGTAAGAGTACTGGTACTTTGCACTCCTGATAAAGCTCAGGAAGCAAAAGATGCAGGTGCTGAGCACGTAGGTCTTGACGACTATATTCAAAAAATTGAAGGTGGTTGGGTTGATATCGATGTAATCATTACCATGCCTACCGTTATGGCAAAAGTAGGTAAGCTGGGAAGAGTACTTGGTCCAAGAAACCTGATGCCAAATCCGAAAGCTGGTACAGTTACCCTGGAAGTAGGTAAGGCAGTAAAAGAAATCAAGCAAGGTAAAATCGACTTCAAAGTTGATAAAACCGGAATTATTCATGCGAGCATCGGAAAAGTGTCTTTCACTCCCGATAAGCTTACCGACAATGCCAATGAAGTGCTTCAGATGATTGCTAAATTAAAACCGGCATCTGCAAAAGGTACTTACATCAAGAGCATTCATATTTCAAGCACCATGAGTAAGGGTATAACAATAGATAAGGGTTCTATAATAGGATTATAA
PROTEIN sequence
Length: 233
MAKLTKNQKAVQAKFNAEKEYSLTDAAKLVKEITFTKFDATVDLDVRLGVDPKKSDQMVRGIVALPHGTGKNVRVLVLCTPDKAQEAKDAGAEHVGLDDYIQKIEGGWVDIDVIITMPTVMAKVGKLGRVLGPRNLMPNPKAGTVTLEVGKAVKEIKQGKIDFKVDKTGIIHASIGKVSFTPDKLTDNANEVLQMIAKLKPASAKGTYIKSIHISSTMSKGITIDKGSIIGL*