ggKbase home page

H3-16-all-fractions_k255_2869444_1

Organism: H3-16-all-fractions_metab_64

near complete RP 45 / 55 MC: 6 BSCG 42 / 51 MC: 10 ASCG 9 / 38 MC: 2
Location: comp(3..890)

Top 3 Functional Annotations

Value Algorithm Source
sugar transport protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744B95 similarity UNIREF
DB: UNIREF100
  • Identity: 54.7
  • Coverage: 296.0
  • Bit_score: 316
  • Evalue 1.80e-83
major facilitator superfamily protein similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 292.0
  • Bit_score: 273
  • Evalue 6.50e-71
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEI48904.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.3
  • Coverage: 292.0
  • Bit_score: 273
  • Evalue 3.20e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Runella slithyformis → Runella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 888
ATGAAACAACTGTCAGAACGCTGGTTGCTTTTGCTGCTCGCGGCAGTGCAATTCACGCACATCGTGGATTTCATGATTCTCATGCCGCTCGGGCCGCAACTCATGCGCGATCTGCACATCGGCCCGAAACAATTCAGTTCGCTGGTGGCCGCGTACACCATCAGCTCCGGCATCGTCGGCATCCTGACCGCGCCGTTCATTGACCGTTTCGACCGTCGAAAGTTGCTATTGCTCGCGTACGGTGGATTTATTTTCGGGACGCTCTCGTGCGCGCTTTCCACGACCGCTTCTGCGCTTCTCGTGGCAAGGGCGTTGAGTGGCGCGTTCGGCGGTTTATCCATCGCGATGGTCATGTCGATCATCGGCGATGTGGTGCCGGCGCACCGGCGGGCCTCGGCCATGGGGATTGTGATGACAGCATTCTCGGTGGCATCGGCTGTGGGCATTCCATTTGGATTGCAGTTGGCGCAACAGTTTCGCTGGGAAGCGCCGTTTTTCGCGGTGGCCGCCATCGGGACAATTATGTGGATCATCGCATTCCTGCGACTCCCGCCTGTTCGCGGACATTTGGACCACGGCGACGATGACCCGGCGCGGGCGTTTATGGCGTTGCTGCGAGATACCAATGCCGGACGCGCACTCCTCTTCATGACGGTGACGGTGCTTGGCCATTTTGCCATCATCCCGCTGCTTTCGCCATTTCTGGTCGGCAACGTGGGTTTGCCGGAGCGCGATTTGTTCATGGTTTATTTAACAGGTGGAGTGCTGACCGTGTTTACGGCGCCGGTCGTTGGCAAGCTGGCCGACTCGCTTGGCCGCCAACGCGTGTTCACTTTCATGGTGGTCGCGGCCTGCCTGGTGACCTTGTTCATCACAAATTCCGGGCCG
PROTEIN sequence
Length: 296
MKQLSERWLLLLLAAVQFTHIVDFMILMPLGPQLMRDLHIGPKQFSSLVAAYTISSGIVGILTAPFIDRFDRRKLLLLAYGGFIFGTLSCALSTTASALLVARALSGAFGGLSIAMVMSIIGDVVPAHRRASAMGIVMTAFSVASAVGIPFGLQLAQQFRWEAPFFAVAAIGTIMWIIAFLRLPPVRGHLDHGDDDPARAFMALLRDTNAGRALLFMTVTVLGHFAIIPLLSPFLVGNVGLPERDLFMVYLTGGVLTVFTAPVVGKLADSLGRQRVFTFMVVAACLVTLFITNSGP