ggKbase home page

H3-16-all-fractions_k255_7404023_3

Organism: H3-16-all-fractions_metab_64

near complete RP 45 / 55 MC: 6 BSCG 42 / 51 MC: 10 ASCG 9 / 38 MC: 2
Location: comp(1308..2012)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.6
  • Coverage: 234.0
  • Bit_score: 344
  • Evalue 6.90e-92
Pseudouridine synthase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XS61_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 72.6
  • Coverage: 234.0
  • Bit_score: 344
  • Evalue 4.90e-92
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 47.8
  • Coverage: 228.0
  • Bit_score: 221
  • Evalue 1.80e-55

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 705
ATGGTTCGCCTTCAAAAATTTCTCGCGGATGCCGGGATCGCTTCCCGGCGCGCCAGTGAACAATTCATTCTCGAGGGCCGGGTGGAGGTCAATGGCCAGACCGTTCGCCAGCTCGGCACCAAAATAGATCCCCTTCACGACCGTGTCACGGTGGACGGCAAGCCGGTTCGCGCCAAACGCAAACTTTACGTCGCCCTCAATAAACCGCGCGGCTGTGTCTGTTCCCGGAAAGATGAGTTCAAGCGCCCCACCATCTACGAATTGCTCCCCAAAGAATGGGACAATCTTTACTCGGTGGGCCGTCTCGATTATGACACAGAAGGATTGATTTTCCTGACGAATGATGGACAATTCGCCCTGCGGTTGACGCATCCACGCTATGAAATCCGCAAGAAATACGTGGTGATGGTCGAGGGCCGTGTGGAACAGGAGATGCTTAATCGTTTCACGACCGGTGTGTTTCACGAAGGTGAAAAGCTAAAGGCGCAAAAGGCTCGGCTGGTTTCAGCGACCAAATCCGTCAGCGTGGCGGAACTGGAATTAACCGAAGGCAAAAATCGCGAAGTGCGGCGGATGTTTGAATCGCAGGGCGCCACGGTAAAACGTCTGCAGCGTGTGCAGATCGGAAAAATAAAGCTGGGCGAATTGAAACCCGGCAAATGGCGGACATTGACAGAACCGGAGATAATCTCTCTACTTGGCTGA
PROTEIN sequence
Length: 235
MVRLQKFLADAGIASRRASEQFILEGRVEVNGQTVRQLGTKIDPLHDRVTVDGKPVRAKRKLYVALNKPRGCVCSRKDEFKRPTIYELLPKEWDNLYSVGRLDYDTEGLIFLTNDGQFALRLTHPRYEIRKKYVVMVEGRVEQEMLNRFTTGVFHEGEKLKAQKARLVSATKSVSVAELELTEGKNREVRRMFESQGATVKRLQRVQIGKIKLGELKPGKWRTLTEPEIISLLG*