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H3-16-all-fractions_k255_7563648_6

Organism: H3-16-all-fractions_metab_64

near complete RP 45 / 55 MC: 6 BSCG 42 / 51 MC: 10 ASCG 9 / 38 MC: 2
Location: 2879..3454

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.6
  • Coverage: 191.0
  • Bit_score: 273
  • Evalue 1.60e-70
Peptide deformylase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGP3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 69.6
  • Coverage: 191.0
  • Bit_score: 273
  • Evalue 1.10e-70
peptide deformylase similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 186.0
  • Bit_score: 162
  • Evalue 8.00e-38

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 576
ATGATTCTGAAAGTGGTTAAATATGGAGACCCGGTGTTGCGCAAAGAGGGCAAGCGTATAGAGGCAATCACACCGGAAATCAAAACGTTGATAGCGGACATGTTCGAAACCATGTACGCGCACAAGGGCGTTGGGCTGGCAGCGCAGCAGATTGGGCAGGCGTTGCAAGTAACTGTCATCGACGTGCGCGGCGTCACCGATCGGCCATCTTCGCTGGAGTTGAAGGGCAAGCCGGCGGACGTGGCGGAATTCATGCCGTTGGTTTTGATCAATCCTGAATTGAAACTCGTTGGTGACGTTGTGGCCGGGCCGGAGGGTTGCCTGAGTTTTCCGGAAGTGTTCGCCGAAATTTCTCGCCCTCAGTTTGTGGACGTAAAGGCATTGAACGAGAAGGGCAAGCCGGTTGAGTTCCGCTGCGGCGGATTGCTGGCCCGCGCCGTGCAGCATGAGACGGATCATTTGAAGGGCATCTTGTTCATCGACCGCATGGAGAAAAAGACGAAGGAAGAACTGAAGCCGGAACTGGACGCGCTTCAGAGCGAAACGAAGGCGGAGTTGGCCGTACGGAAGAGATAG
PROTEIN sequence
Length: 192
MILKVVKYGDPVLRKEGKRIEAITPEIKTLIADMFETMYAHKGVGLAAQQIGQALQVTVIDVRGVTDRPSSLELKGKPADVAEFMPLVLINPELKLVGDVVAGPEGCLSFPEVFAEISRPQFVDVKALNEKGKPVEFRCGGLLARAVQHETDHLKGILFIDRMEKKTKEELKPELDALQSETKAELAVRKR*