ggKbase home page

H3-16-all-fractions_k255_34800_3

Organism: H3-16-all-fractions_metab_64

near complete RP 45 / 55 MC: 6 BSCG 42 / 51 MC: 10 ASCG 9 / 38 MC: 2
Location: 2000..2737

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQ34_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 67.3
  • Coverage: 202.0
  • Bit_score: 290
  • Evalue 1.20e-75
algU1; RNA polymerase sigma-H factor AlgU similarity KEGG
DB: KEGG
  • Identity: 31.8
  • Coverage: 201.0
  • Bit_score: 105
  • Evalue 1.50e-20
Tax=GWF2_Verrucomicrobia_62_7_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.2
  • Coverage: 198.0
  • Bit_score: 299
  • Evalue 2.70e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWF2_Verrucomicrobia_62_7_curated → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 738
ATGGCCGTTATCTCAAGATCGGCGAAATCCAGGATTCTATTATTAGCGCCCTCGGCAGTGGGGACATGGGTTGTAGGTCTGTTCAAACGCATCGGTCTCGTTTACACTCTGATTGGCATGGCATCCGAAGCTGAATTGCTGGCTCGTTGCCGGCGTGGTGAGGCCGAAGCGTGGGATGAATTATTCGATTTGCACTACGCGGCTGCGGGACGGTTCATTTTTCAACTCGCTCCGGATTTCTCGCGTGAGGACGCGGAGGAAATCTGCCAGGAAGCTTTTCTTTCCGTTGTCCGCAATCTGGGCTCCTTCCATGGTGACAGCCAGTTTCAAACGTGGTTGTTCCGGATTGCCGCAAACAAAGCGCGGGATTTTCGCGAGCGCAGGAATGCTGCCAAGCGCGGGAGCGGTGACACGCCCATTTCCCTGCAAGCGGAGAATCCCGAGACCGGTTTGACTCTGGATCCCCCGGCCGAACTTCCCGGGCCGGATGAGATCATCATGAGCGCGGAAAAAATGGCGCTGGTGCGGGAGGCGTTGGATTCATTGGGAGAGCCATGCCGGGAAATTATCGAACTGCGCTATTTCGGGGATTTGAGTTATGAAGAGTTGAGCCGCACCTTGAAGTTGAACCCGAAGACGGTCAGTTCGCGACTGAGCAAATGTCTCGACCGCCTGGAAGGGGTAGCGCGAAGAGTTTTTTCACGGGAAAAGTCGGGTGCTTTCCCGTCCAACCAATAG
PROTEIN sequence
Length: 246
MAVISRSAKSRILLLAPSAVGTWVVGLFKRIGLVYTLIGMASEAELLARCRRGEAEAWDELFDLHYAAAGRFIFQLAPDFSREDAEEICQEAFLSVVRNLGSFHGDSQFQTWLFRIAANKARDFRERRNAAKRGSGDTPISLQAENPETGLTLDPPAELPGPDEIIMSAEKMALVREALDSLGEPCREIIELRYFGDLSYEELSRTLKLNPKTVSSRLSKCLDRLEGVARRVFSREKSGAFPSNQ*