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H3-16-all-fractions_k255_1901980_2

Organism: H3-16-all-fractions_metab_64

near complete RP 45 / 55 MC: 6 BSCG 42 / 51 MC: 10 ASCG 9 / 38 MC: 2
Location: 2143..2712

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5Z1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 50.6
  • Coverage: 176.0
  • Bit_score: 184
  • Evalue 5.30e-44
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EDY18194.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.6
  • Coverage: 176.0
  • Bit_score: 184
  • Evalue 7.40e-44
RNA polymerase sigma-E factor similarity KEGG
DB: KEGG
  • Identity: 35.2
  • Coverage: 193.0
  • Bit_score: 98
  • Evalue 1.40e-18

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 570
ATGGCCGATAATTCACAACCCGGCGCGCCACAAAATGGCGCTGAAGCGAGCGCACCGTCCGAAAAGACGATGCGCGTGCAACAGCTTTTCGTGAAGCACCAACTCGCCGTGCGTGCCTTCATCTTGTCGCTGGAACCGAATTTCACCGACGCCGAGGATCTGCTCCAGGAAGTGTTCCTGGTGGTCACCCGCAAAGCGAACGACTTCCAGGAGGGGACAAACTTTTTCGCATGGGCCTGCACCATCGCGCGATACAAGCTGCTCGAGTCCATTCGCCGCCGCGCGCGGTCGCAAGTGCTCTCGGAAGAAGTCATAGAGAGCCTTTGTTCGGTCGAGCCGGAACCGCATTTTGATGATTCGCGGCTCGCCATTTTGCAACATTGCCTGGAGCAACTTGCGCCGAAAGCGCGGCAGATGATGTATCTCCGCTACTACGGCGAACATTCCCCGGCCCAAATCGCGCGGCTGGTTTCGTGGACGCCGAACGCCGTCCGGGTGGCGCTGTCCCGCGCGCGCAACGTGTTGCAGGAATGTCTCGAGCGAAAAATCCGGCAGGAGGGCGCTCAATGA
PROTEIN sequence
Length: 190
MADNSQPGAPQNGAEASAPSEKTMRVQQLFVKHQLAVRAFILSLEPNFTDAEDLLQEVFLVVTRKANDFQEGTNFFAWACTIARYKLLESIRRRARSQVLSEEVIESLCSVEPEPHFDDSRLAILQHCLEQLAPKARQMMYLRYYGEHSPAQIARLVSWTPNAVRVALSRARNVLQECLERKIRQEGAQ*