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H3-18-all-fractions_k255_3337776_8

Organism: H3-18-all-fractions_metab_conc_4

partial RP 29 / 55 MC: 5 BSCG 29 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: comp(9773..10318)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H543_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 93.9
  • Coverage: 181.0
  • Bit_score: 339
  • Evalue 2.10e-90
Bradyrhizobium elkanii strain UASWS1015 Contig186, whole genome shotgun sequence {ECO:0000313|EMBL:KIU44239.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 181.0
  • Bit_score: 339
  • Evalue 1.70e-90
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 88.4
  • Coverage: 181.0
  • Bit_score: 329
  • Evalue 3.60e-88

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Taxonomy

Bradyrhizobium elkanii → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
ATGCTGACGCCAGCTGAACTGGTCTGGCTGATCGCTGCCGTTGCGAAGGGGGATGAGGCCGCTTTCGAGCGTCTTTACGCGGCCACGCGCGCGAAACTTTTCGGGGTCGTGCTGCGTATTTTGCGGCGACAGGATCTCGCCGAGGAGGTCATTCAGGAGACTTACGTCAAGATCTGGAACAACGCGGGCCAGTTCAATCCCGCGCTCGCGTCTCCGATCACCTGGATGGCATCGATCGCGCGCAACCGAGCCATCGACGTGGTCCGCAAGCGAAGCGAAGTCTCGTTGGAAGAGGAGCCCGCGGCGATGGAAGTGGCCGGCGATTCACCCGATCCGCTGGCGCGGCGCGAGATGGCGGAGGAGTTGAAGCGGCTCCTGGAGTGTGTCGGCCGACTGGAGCCGGATCGGCAGAAGCTCGTGTTGCTGGCCTATTACAACGGCTGGAGCCGCGAGCAGCTGGCCGCGAAGTTCGAGGCACCGGTGAATACGGTGAAGACGTGGCTGCGCCGCAGCATGATGGATATAAGGGAGTGTCTCGGACTTTAG
PROTEIN sequence
Length: 182
MLTPAELVWLIAAVAKGDEAAFERLYAATRAKLFGVVLRILRRQDLAEEVIQETYVKIWNNAGQFNPALASPITWMASIARNRAIDVVRKRSEVSLEEEPAAMEVAGDSPDPLARREMAEELKRLLECVGRLEPDRQKLVLLAYYNGWSREQLAAKFEAPVNTVKTWLRRSMMDIRECLGL*