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S1-16-all-fractions_k255_1697982_8

Organism: S1-16-all-fractions_metab_52

near complete RP 43 / 55 MC: 4 BSCG 42 / 51 MC: 10 ASCG 14 / 38 MC: 2
Location: comp(4386..4898)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase ECF subfamily sigma factor n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4NDQ6_KITSK similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 168.0
  • Bit_score: 192
  • Evalue 3.00e-46
RNA polymerase subunit sigma24 {ECO:0000313|EMBL:KDN84495.1}; TaxID=1348663 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora cheerisanensis KCTC 2395.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.1
  • Coverage: 167.0
  • Bit_score: 197
  • Evalue 1.30e-47
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 58.1
  • Coverage: 167.0
  • Bit_score: 193
  • Evalue 4.90e-47

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Taxonomy

Kitasatospora cheerisanensis → Kitasatospora → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 513
ATGCTCCGCGGCGACGAGGCGGGGTTCCGGAGCGTCTACCGGGCGGTCCAGCCGCCGCTGCTGCGCTACCTGACGGTCCTGGTGGGGGCGGTCGATGCGGAGGACGTGGCCAGCGAGGCGTGGGCACAGGCCTTCCGCGACCTCGACCGGTTCACCGGCGACGCCGACGGCTTCCGCGGCTGGGTCACCACGATCGGTCGCAACCGGGCGCTCGACCACCTCCGGCGCGCCAACCGCCGACCCGTCAGCGACCAGGCCCTCGACGACCTCGTCGAGCTCCCGGACACCGTCGACGTCGAGCTCGACAGCCTCGGGCGGATGGGCTCCCAGGCGGTCCTGCGACTCATCGCGTCGCTGCCACCGGACCAGGCCGAGGCGATCATGCTGCGGACGGTCCTGGGCTTCGACGCCCCCACCGCGGCACGGATCCTGGGGAAGCGGCCCGGTGCGGTGCGGGCGGCTGCCCACCGCGGCCTCAAGCAGCTGGCGAAAAAACTTTCGGAGGAGCCGTAA
PROTEIN sequence
Length: 171
MLRGDEAGFRSVYRAVQPPLLRYLTVLVGAVDAEDVASEAWAQAFRDLDRFTGDADGFRGWVTTIGRNRALDHLRRANRRPVSDQALDDLVELPDTVDVELDSLGRMGSQAVLRLIASLPPDQAEAIMLRTVLGFDAPTAARILGKRPGAVRAAAHRGLKQLAKKLSEEP*