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S1-16-all-fractions_k255_6148173_5

Organism: S1-16-all-fractions_metab_52

near complete RP 43 / 55 MC: 4 BSCG 42 / 51 MC: 10 ASCG 14 / 38 MC: 2
Location: 4026..4544

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SHA4_NOCSJ similarity UNIREF
DB: UNIREF100
  • Identity: 66.9
  • Coverage: 166.0
  • Bit_score: 221
  • Evalue 6.00e-55
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.5
  • Coverage: 165.0
  • Bit_score: 229
  • Evalue 1.80e-57
sigma-70 region 2 domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 66.9
  • Coverage: 166.0
  • Bit_score: 221
  • Evalue 1.70e-55

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Taxonomy

Intrasporangium oryzae → Intrasporangium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 519
ATGCCGAAGGACGAGGTCGCCCTGATGCAGCGGGTGCACGACGAGCACGCCGACGTGCTGTGGCGCTTCTGCCTGAGCCTCGTCGGCAACGACCGGGCCCGCGCCGAGGACGTCACCCAGGAGACGCTGCTGCGCGCCTGGCGGCACCGCGCCGTGCTCGAGGGCTCGCCTGCGGCCGTCCGCTCCTGGCTGTTCACGGTGGCCCGCAACATCGTCATCGACGAGTGGCGCAGTCGGCGCGCCCGGCCCGAGACCTCCGTCGAGGAGGTCCCGGAGCAGCGGCGCTCGATGGAGGTCGACGAGAGCGACCAGCTCCTCCTGTCGTGGGTGGTGGCGGAGGCGCTCACGCACCTGTCCGAGGACCACCGCACCGTGCTGCTCCAGTGCTACTACCGCGGCCGCCCCGTCGCGGAGGTCGCGCGCCTGCTCGGGGTGCCGCCCGGCACGGTGAAGTCCCGGACGCACTACGCGTTGCGCGCGCTCAGGCTGGCGCTCGAGGAGATGGGGGTGAGCGCATGA
PROTEIN sequence
Length: 173
MPKDEVALMQRVHDEHADVLWRFCLSLVGNDRARAEDVTQETLLRAWRHRAVLEGSPAAVRSWLFTVARNIVIDEWRSRRARPETSVEEVPEQRRSMEVDESDQLLLSWVVAEALTHLSEDHRTVLLQCYYRGRPVAEVARLLGVPPGTVKSRTHYALRALRLALEEMGVSA*