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S1-16-all-fractions_k255_6185743_7

Organism: S1-16-all-fractions_metab_52

near complete RP 43 / 55 MC: 4 BSCG 42 / 51 MC: 10 ASCG 14 / 38 MC: 2
Location: 6009..6854

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Saccharomonospora paurometabolica YIM 90007 RepID=G4IWA2_9PSEU similarity UNIREF
DB: UNIREF100
  • Identity: 70.1
  • Coverage: 281.0
  • Bit_score: 383
  • Evalue 1.50e-103
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:KGN41201.1}; TaxID=1385519 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia aerolata DSM 18566.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.7
  • Coverage: 279.0
  • Bit_score: 414
  • Evalue 8.50e-113
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 69.9
  • Coverage: 272.0
  • Bit_score: 359
  • Evalue 8.60e-97

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Taxonomy

Knoellia aerolata → Knoellia → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 846
ATGGACCAGACGGAGACCTTCGAGGCGGAGCGGCCACGGCTGCTCGGCATCGCGAGCCGGGTGCTCGCCGACCATGCCGAGGCCGAGGACGTCGTCCAGCAGGCGTGGCTGCGACTGGACCGGGCGCTCACCCGCGACGGCACCGAGATCGAGAACCTGCCGGCCTGGCTGACCACGGTGACCACCCGGCTGTGCCTCGACCGGCTGCGGTCGCGGACCCCCGTCCCGGTGGAGGACGTCGAGTTCACCGAGACCTCGCCCGACCCGGCCGACGACGTCGCGCTCGCCGACACGGTCGGCATCGCCCTCCAGGCGGTGATCGACCGGCTGTCCCCGCGCGAGCGGGTGGCCTTCGTGCTGCACGACAGCTTCGGCTTCGAGTTCGGCACCATCGCCGCCGTCCTCGACACCACGCCCGCTGCGGCGCGCAAGCTGGCCTCGCGCGCTCGGGCCAAGGTCGCGCAGCCGGCCGCGGAGGACGCGCTCGCGGACTGGGAGGTGGTGGACGCGTTCATGGCGGCCGCGCGTGGCGGTGACTTCGAGCGACTGCTCCAGCTGCTCGCACCCGACGCCGTGGTCGGCGCGGACGAGGCGGCCATCCTCGCCGGCACCCCGGCCACGATCGAGGGCCGCGACGAGGTCGCCACCTTCTTCAACGGCAGCGCCCAGTCCGCGCTGGCGGTCTTCGTCGGCGAACGGCCGGCATCCGCCTGGTTCCTGCGTGGCGAGGCCAGGGTCGTCTTCGACTTCACCGTCGACCACGGCCGGGTCACGGGCATCACGTTCCGCGCGGAGCCCGCGGTGCTCGCCCAGGTCGTACGCCGCTCGGGTGCCGACCGGAAGTAG
PROTEIN sequence
Length: 282
MDQTETFEAERPRLLGIASRVLADHAEAEDVVQQAWLRLDRALTRDGTEIENLPAWLTTVTTRLCLDRLRSRTPVPVEDVEFTETSPDPADDVALADTVGIALQAVIDRLSPRERVAFVLHDSFGFEFGTIAAVLDTTPAAARKLASRARAKVAQPAAEDALADWEVVDAFMAAARGGDFERLLQLLAPDAVVGADEAAILAGTPATIEGRDEVATFFNGSAQSALAVFVGERPASAWFLRGEARVVFDFTVDHGRVTGITFRAEPAVLAQVVRRSGADRK*