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S1-18-all-fractions_k255_6724111_2

Organism: S1-18-all-fractions_metab_conc_39

partial RP 39 / 55 MC: 4 BSCG 38 / 51 MC: 8 ASCG 10 / 38 MC: 3
Location: comp(476..991)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SC06_INTC7 similarity UNIREF
DB: UNIREF100
  • Identity: 67.3
  • Coverage: 162.0
  • Bit_score: 210
  • Evalue 1.10e-51
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 70.8
  • Coverage: 154.0
  • Bit_score: 216
  • Evalue 3.20e-54
RNA polymerase sigma-54 factor RpoN {ECO:0000313|EMBL:AIY19332.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.8
  • Coverage: 154.0
  • Bit_score: 216
  • Evalue 1.60e-53

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Taxonomy

Pimelobacter simplex → Pimelobacter → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 516
ATGAAACGGCCGTTTGAAGAGATCGTCGCCGAGCACGGACCAACCGTGCTCCGGGTGTGCCGCGCCGTGCTTGCTCAGCCAGACGCCGACGATGCCTGGTCAGAGACCTTCCTTGCCGCCTTGCGCGCATATCCAGACCTCGCCGATGGCGCCAATATCGAGGCGTGGCTGGTCACTATTGCGCACCACAAGGCGATTGATGTGTTGCGTGCGCAGAGTCGCCGCGCTGTGCCGGTTGCCGCGATTGCAGAAGGCCGATCCGCAACCGAGGGCTGGGAACCATCCGACGACGACCTGTGGGCCGCGCTTCGCGCGCTCCCGATCAAGCAGCGACAGGCCGTCGCGTACCACCATGTGGCGGGCCTGCCGTACGCGGAGGTCGCCGCCCTCGTCGGGGGGTCGACGGATGCAGCGCGACGTGCCGCCCACGACGGCATTCGCGCTCTGCGGCGCCGTTACCTCAACTCAACAAATCTCACACCGCAGGAGGAATCCGCTCGTGATCAACTTCAATGA
PROTEIN sequence
Length: 172
MKRPFEEIVAEHGPTVLRVCRAVLAQPDADDAWSETFLAALRAYPDLADGANIEAWLVTIAHHKAIDVLRAQSRRAVPVAAIAEGRSATEGWEPSDDDLWAALRALPIKQRQAVAYHHVAGLPYAEVAALVGGSTDAARRAAHDGIRALRRRYLNSTNLTPQEESARDQLQ*