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S1-18-all-fractions_k255_819909_17

Organism: S1-18-all-fractions_metab_42

near complete RP 46 / 55 MC: 4 BSCG 46 / 51 MC: 5 ASCG 12 / 38 MC: 2
Location: comp(16334..17290)

Top 3 Functional Annotations

Value Algorithm Source
rluD; ribosomal large subunit pseudouridine synthase D (EC:4.2.1.70); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] id=12556576 bin=CNBR_ACIDO species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 58.1
  • Coverage: 320.0
  • Bit_score: 351
  • Evalue 5.50e-94
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 310.0
  • Bit_score: 310
  • Evalue 4.00e-82
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 70.0
  • Coverage: 310.0
  • Bit_score: 431
  • Evalue 9.90e-118

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Taxonomy

R_Acidobacteria_68_18 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 957
ATGTCACGGGTGGAGCTCGCCGTCACCGACGAGTACGCCGGCGAGCGGCTCGACCGGTTCCTCGCCGCAGTGCTGCCTGGGCACTCGCGCTCGCAGATCCAGCGGCTGATCAAGGAGGGCCTGGTGCAGGTGGGTCCACGCGCCGTCCGGGCGAACGCGAGCGTGCGGACGGGCGACACGGTCGTCGTGGACGTGCCCGCTCCAACTGCTGCGGAACCTGCCGCCGAGGACATTCCGCTCGACATCGCCTACGAGGATTCCCACCTGATCGTGGTGAACAAGGCCGCTGGAATGGTCGTGCATCCGGCCGCCGGACACGCCGGCGGCACGCTCGTGAACGCGCTGCTGCACCACGTCACCGATCTCAGCGGGATTGGCGGCGAGCTGCGCCCCGGAATCGTCCACAGGCTCGATCGCGGCACGTCAGGACTGATCGTGGTCGCAAAGCACGATCGGGCCCACGAGTTACTCGCCCGGCAGTTCCATGACCGCGAGGTCGAGAAGGATTACCTGGCCCTGGTCTGGGGCGTCGTGCAGGCGGGACGTCGCATCGAAGCGCCGATCGGACGCGATCCCGTGAACCGCCAGAAGATGTCGGCGCGCTCGCGGAGGGCACGCACGGCGGTGACGCGCATCACGCGCGTGCAGCACCTCAAGGGCGTCACCCTGGCGCAGATCGCCATCCACACCGGACGCACCCACCAGATCCGGGTGCACCTGAGCGCGATCGGGCACCCGATCGCAGGCGATGTGCTCTATGGAGGGGCCCGCCGCCGGGTCCCAGCCGACCTGAGGCCCATCCTCCGCCTGGAGCGGCCATTCCTGCACGCCGCACGGCTTGCGTTCACGCATCCAATCGACGGGCGCCGCCTCGAGTTCACCGCGGCGCTGCCACGCGATCTGCAGACAGTGTTGGACGAGATCGTGCAATTACAGGAGCCCGCGGGCGACGGATAG
PROTEIN sequence
Length: 319
MSRVELAVTDEYAGERLDRFLAAVLPGHSRSQIQRLIKEGLVQVGPRAVRANASVRTGDTVVVDVPAPTAAEPAAEDIPLDIAYEDSHLIVVNKAAGMVVHPAAGHAGGTLVNALLHHVTDLSGIGGELRPGIVHRLDRGTSGLIVVAKHDRAHELLARQFHDREVEKDYLALVWGVVQAGRRIEAPIGRDPVNRQKMSARSRRARTAVTRITRVQHLKGVTLAQIAIHTGRTHQIRVHLSAIGHPIAGDVLYGGARRRVPADLRPILRLERPFLHAARLAFTHPIDGRRLEFTAALPRDLQTVLDEIVQLQEPAGDG*