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S3-16-all-fractions_k255_5456990_3

Organism: S3-16-all-fractions_metab_conc_49

partial RP 22 / 55 BSCG 22 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(2561..3538)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SCP4_GEOOG similarity UNIREF
DB: UNIREF100
  • Identity: 96.3
  • Coverage: 323.0
  • Bit_score: 628
  • Evalue 2.40e-177
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 96.3
  • Coverage: 323.0
  • Bit_score: 628
  • Evalue 6.70e-178
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB74279.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.3
  • Coverage: 323.0
  • Bit_score: 628
  • Evalue 3.30e-177

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Taxonomy

Geodermatophilus obscurus → Geodermatophilus → Geodermatophilales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 978
GTGACGACCGTGCTCACCGACGAACTGGACCCGCGACTGCTCGAGCACCGGCGGGAGCTGACCGGCTACTGCTACCGGATGCTCGGGTCGGCCTTCGACGCCGACGACGCGGTGCAGGAGACGATGGTCCGCGCCTGGCGGGGCCTGGCCGACTTCGAGGGCCGCTCGGCGCTGCGCTCCTGGCTGTACCGGATCGCCACGAACGTCTGTCTCGACCAGCTCTCCGGCCGGCAGCGGCGGGCGACGCCCATGGACCTCTCCGGCTCGCCGTGGCAGCCGGTGGAGGCCTCGCTGGCCGCCCGGCGCCCGGGGACGGCGTGGGTGGAGCCGGTGCTCGACCGGCAGGTCGTCGCCGAGGACTCCGACCCCGCCGAGCAGGCCGTGCAGCGGGAGTCGATCCGGCTGGCCTTCGTCTCCGCGCTGCAGCACCTGCCGCCGCGCCAGCGGGCCGTGCTGCTGCTGCGCGAGGTGCTCCGCTGGCGGGCCGACGAGGTCGCCCAGCTGCTCGACACCACCGTCGCGTCGGTCAACAGCGCGCTGCAGCGGGCCCGCGCCACGATGGCCGAGGTCGGCGGCGAGGAGGAGACCGAGCCGCTGGACGACGTCCACCGCGCCCTGCTCGAGCGCTACGTCGACGCCTTCGAGCGCTACGACGTCGAGGGCCTCGTCGGGCTGCTGCACGAGGACGCCACCCAGCACATGCCGCCGTTCGCCATGTGGCTGCGGGGCCGGGCCGACATCGGCACCTGGATGCTCGGCCCGGGTGCGAAGTGCCGCGGCTCGCGGGTGCTGCCGACCCTCGCCAACGGGGCGCCGGCCTTCGCCCAGTACCGCCCCCGTGCCGGCGGCGGGCACGAGCCGTGGGCGCTGCACGTGCTCGAGGTGCGCGCCGGCCGGGTCGCGCACATCTCCAGCTTCCTGGACCTCGACAACGACCTGTTCCGGCGGCTCGGCCTGCCGGTCGAGCCCCCCGCCTGA
PROTEIN sequence
Length: 326
VTTVLTDELDPRLLEHRRELTGYCYRMLGSAFDADDAVQETMVRAWRGLADFEGRSALRSWLYRIATNVCLDQLSGRQRRATPMDLSGSPWQPVEASLAARRPGTAWVEPVLDRQVVAEDSDPAEQAVQRESIRLAFVSALQHLPPRQRAVLLLREVLRWRADEVAQLLDTTVASVNSALQRARATMAEVGGEEETEPLDDVHRALLERYVDAFERYDVEGLVGLLHEDATQHMPPFAMWLRGRADIGTWMLGPGAKCRGSRVLPTLANGAPAFAQYRPRAGGGHEPWALHVLEVRAGRVAHISSFLDLDNDLFRRLGLPVEPPA*