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S3-18-all-fractions_k255_2983568_8

Organism: S3-18-all-fractions_metab_conc_12

near complete RP 48 / 55 MC: 3 BSCG 50 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: 9799..10464

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: collagen alpha-1(II) chain-like isoformX2 n=1 Tax=Oreochromis niloticus RepID=UPI00022AF6DD similarity UNIREF
DB: UNIREF100
  • Identity: 30.0
  • Coverage: 180.0
  • Bit_score: 55
  • Evalue 4.30e-05
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 38.6
  • Coverage: 83.0
  • Bit_score: 55
  • Evalue 1.60e-05
Fibrillar collagen {ECO:0000313|EMBL:BAG67025.1}; Flags: Fragment;; TaxID=980415 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Cyclostomata; Hyperoartia; Petromyzontiformes; Petromyzontidae; Lethenteron.;" source="Lethenteron camtschaticum (Japanese lamprey) (Lampetra japonica).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.0
  • Coverage: 75.0
  • Bit_score: 55
  • Evalue 7.90e-05

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Taxonomy

Lethenteron camtschaticum → Lethenteron → Petromyzontiformes → Chordata → Metazoa

Sequences

DNA sequence
Length: 666
ATGCTTTCGACCAGAACCTTCATCGCCTCGGCGATCGTCGCCCTTGTTGCCACGTTCGCGTCGTCGACCCGTGCCGCCGCACAGGCTGCCGCGTCCAGACCGGCTTTCCCGCCGGGTCCGAGCGCTGCCACCTACCCGCCCGGCCCAAGCACCCGAGCCTATCCGCCTGGCCCGAGCGCACCAGGCGCGTCGGCAACGGTGCTCGGCGGCCAGCCGCCGAAGGTCTATTACGCGTGCTACGTCCCGAGCAGCGGCGTCACGTACCGCATCAAGGAAGTAGACATCAAGCAGACCTGCTCCACCGATCACGTCATGTTCTCATGGACAGACGGCGGCACTCCCGGACCACAGGGGCCCAAGGGCGACCCGGGACCGCAGGGGCCACAGGGCGTTCCCGGAACGTCTGGAGCCTTTGATATACAGGCCGTCCTCGGGGACGTGGTGGACCTGCCACCCGGGTACGATGTAGACGCCTTCGCGGTGTGCCCGGCTGGGACGAAGGTTATCGGCGGCGGATTTTACCTCTCGCCAACCTTTAGCCCGGCACCCGGCCTCATCAAGTCGAGGGCTGATATGGCTTACAACAGGTGGGCGGTCGAACTGTTGAACACGGCGCCCAATGCTCACGCGCAGTCCGTCTACGCGTACGCCTACTGTATCAAGTGA
PROTEIN sequence
Length: 222
MLSTRTFIASAIVALVATFASSTRAAAQAAASRPAFPPGPSAATYPPGPSTRAYPPGPSAPGASATVLGGQPPKVYYACYVPSSGVTYRIKEVDIKQTCSTDHVMFSWTDGGTPGPQGPKGDPGPQGPQGVPGTSGAFDIQAVLGDVVDLPPGYDVDAFAVCPAGTKVIGGGFYLSPTFSPAPGLIKSRADMAYNRWAVELLNTAPNAHAQSVYAYAYCIK*