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S3-18-all-fractions_k255_4552897_13

Organism: S3-18-all-fractions_conc_56

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 MC: 3 ASCG 11 / 38
Location: 15572..17281

Top 3 Functional Annotations

Value Algorithm Source
sigma 38, RpoS; K03086 RNA polymerase primary sigma factor id=12556622 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 56.3
  • Coverage: 565.0
  • Bit_score: 598
  • Evalue 4.60e-168
rpoD; RNA polymerase sigma factor rpoD similarity KEGG
DB: KEGG
  • Identity: 54.4
  • Coverage: 564.0
  • Bit_score: 579
  • Evalue 6.20e-163
Tax=RBG_13_Acidobacteria_68_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.7
  • Coverage: 561.0
  • Bit_score: 654
  • Evalue 7.60e-185

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Taxonomy

RBG_13_Acidobacteria_68_16_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1710
TTGACCATTTCTAGCCTCACACCTGTGGAAGAGAAGTACACCTCGGTCAAGCAGTTGATCGAGCTGGGCAAGGAGAAGGGCTATCTCCTCTACGACGAGATCTACGAGATGCTGCCCGAGGAGGTGGTGAGCCTCCCGGATGAGCTGGATGAGATCTACCTCCGGTTCTCGGATCTCGGGGTCGACGTCATCGACCGGCCCGAGCGCTATCAGAACCGGGACGACTTCGAATCGGGCACCGGCGGCGACTTCGAGAAGAAAGAGGATGAAACGACCGAGTTCGGCCTCACCTCGCACGAGAAGACGAACGACCCCGTCCGCATGTATCTGCGCGAGATGGGCACGGTCCCCCTCCTCGACCGCGAGGGCGAGGTGGAGATCGCGCAGCGTATCGAGCAGGGCGAGTGGATGATCTACGAGGCGCTTTGCGAGAACCCGGTCGTCCTGCGCGAGCTGTTGCGTCTGAATGAAATGGCGGCCCGGGACAAGCGGATCCTGCGCGAGCTCGTCTCCTCCGACCCCGACGAGCCGCTCGATCCCAAGGCCTCGGACCGCATCCGGGCCAACCTCAAGATCTTCGAGCAGATCGCGGTCAACGACCACGAGATCCAGGAGCTGCGCAAGCGCCAGAAGCGCTGCAAGCCCGACGGCGAGAAGTACCTGGAGATCGAGCGCGAGATCGACCGGCTGGTGGCGAAGATCGCCAAGGACATCCGCACGGTCGACTTCAGCGTCCAGACGCGCAATCGGCTGGTCGACTTCCTGAAGGACATCGACCGGCAGTTCTCCCGCTTCGAGCAGGACATCAAGCGGGCGCAGACGGCGCTCAAGCGGGAGACCAGCGAGGAGCTCAAGGCGCTGCACCGCCGGCGCATCGAGAAGTACCGCGCGAACTTGAAAGAGCTCGAGGAGCGTTACGGCACCACGCACGCGGAGATCGCCGCCACGATCGACAAGATCCGGCAGGGCGAGTCCACCTGCGAGCGCGCCAAGGAGGAGCTCATCGTGGCCAACCTCCGCCTCGTGGTCTCGATCGCGAAGAAGTACACCAACCGCGGTCTGCAATTCCTGGATCTGATTCAGGAAGGCAACATCGGCCTGATGAAGGCGGTGGAGAAGTTCGAGTACCGCCGCGGCTACAAGTTCTCGACCTATGCCACCTGGTGGATCCGCCAGGCGATCACCCGTGCGATCGCCGACCAGGCGCGGACGATCCGCATCCCGGTGCACATGATCGAGACGATCAACAAGCTGACCCGGACGAGCCGGTCGCTGGTGCAGGAGCTGGGCCGCGAGCCCACCGCCGAGGAAATCGGCGAGCGCATGGACCTGCCGGCCTCCAAGGTCCGCAAGATCATGAAGATCGCCCAGGAGCCAATCTCCCTCGAGACGCCGATCGGCGAAGAGGAGGATTCGCACCTTGGGGACTTCATCGAGGACAAGAACGCCATCTCCCCGATCGACTCGGTGATCTTCGCCAACCTGAAGGACCAGACCCGGAAGGTGCTGAAGACCCTGACGCCGCGGGAGGAGCTGGTGCTCAAGATGCGCTTCGGCGTGGGCGACGGCTCCGAGCACACGCTCGAAGAGGTGGGCCGCTCGTTCAACGTCACGCGCGAGCGCATCCGCCAGATCGAGTCGAAGGCCCTGCGCAAGCTCCGCCACCCCAGCCGGGCGACGAAGCTGAAGCCGTTCCTCGACTCCGCGTAG
PROTEIN sequence
Length: 570
LTISSLTPVEEKYTSVKQLIELGKEKGYLLYDEIYEMLPEEVVSLPDELDEIYLRFSDLGVDVIDRPERYQNRDDFESGTGGDFEKKEDETTEFGLTSHEKTNDPVRMYLREMGTVPLLDREGEVEIAQRIEQGEWMIYEALCENPVVLRELLRLNEMAARDKRILRELVSSDPDEPLDPKASDRIRANLKIFEQIAVNDHEIQELRKRQKRCKPDGEKYLEIEREIDRLVAKIAKDIRTVDFSVQTRNRLVDFLKDIDRQFSRFEQDIKRAQTALKRETSEELKALHRRRIEKYRANLKELEERYGTTHAEIAATIDKIRQGESTCERAKEELIVANLRLVVSIAKKYTNRGLQFLDLIQEGNIGLMKAVEKFEYRRGYKFSTYATWWIRQAITRAIADQARTIRIPVHMIETINKLTRTSRSLVQELGREPTAEEIGERMDLPASKVRKIMKIAQEPISLETPIGEEEDSHLGDFIEDKNAISPIDSVIFANLKDQTRKVLKTLTPREELVLKMRFGVGDGSEHTLEEVGRSFNVTRERIRQIESKALRKLRHPSRATKLKPFLDSA*