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This organism can only be binned in the context of its binning project PLM3_127cm_b2_sep2016. Please contact the project owner (lavik17@gmail.com) to become a member and gain access.

S3-18-all-fractions_k255_1409356_1

Organism: S3-18-all-fractions_conc_56

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 MC: 3 ASCG 11 / 38
Location: 240..797

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NS7_SOLUE similarity UNIREF
DB: UNIREF100
  • Identity: 80.5
  • Coverage: 185.0
  • Bit_score: 297
  • Evalue 5.40e-78
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 80.5
  • Coverage: 185.0
  • Bit_score: 297
  • Evalue 1.50e-78
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.9
  • Coverage: 185.0
  • Bit_score: 308
  • Evalue 5.70e-81

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGCCACCCGAACAGGACCAGCGGATCTCCAAAGTGGTCAAGCAGGAGCAGTCCCGGCTGCGCAACTTCATTCGCCGGCACGTGCCCGACCCGCGCGACGTTGAGGACATTCTGCAGGACGTCTTCTATGAGCTGGTGGAAGCGAACCGCCTGCTGATGCCGATCGAGCACGTCACCGGCTGGCTGTTCCGCGTGGCGCGCAATCGCATCACCGATCTCTTCCGCAAGAAGAAGCCGGAGAGCTTCAGCGATACCGCCGTCGCGGACGAGGATGACGAGCTGCTGCGGCTGGAAGACCTGCTGCCTTCGCCCGATGCCGGACCGGAAGCGCTGTATGTCCGCAGCCTGCTTCTCGCTGAGCTCGAGGCGGCGGTCGACGAGCTGCCGCAGGAGCAGCGCGAGGTGTTCGTTGCACACGAGTTGGAAGGGCGCAGCTTCAAGGCGATGGCCGCCGAGACCGGCGTGAGCGTGAACACGCTGCTCTCGCGGAAACGCTATGCGGTGCGGCATCTGCGCGAGCAATTGCAGGGCACTTACGACGAATTTACGAAAGCATGA
PROTEIN sequence
Length: 186
MPPEQDQRISKVVKQEQSRLRNFIRRHVPDPRDVEDILQDVFYELVEANRLLMPIEHVTGWLFRVARNRITDLFRKKKPESFSDTAVADEDDELLRLEDLLPSPDAGPEALYVRSLLLAELEAAVDELPQEQREVFVAHELEGRSFKAMAAETGVSVNTLLSRKRYAVRHLREQLQGTYDEFTKA*