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FFSP_072018_bottom_0_1um_scaffold_810_1

Organism: FFSP_072018_bottom_0_1um_Hydrogenophilales_64_54

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: 2..1864

Top 3 Functional Annotations

Value Algorithm Source
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] id=12493505 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 616.0
  • Bit_score: 1138
  • Evalue 0.0
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.6
  • Coverage: 619.0
  • Bit_score: 1120
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 91.6
  • Coverage: 619.0
  • Bit_score: 1120
  • Evalue 0.0

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1863
GGCGCCGGCGAGGGTGCGGCGCCTTTACATAAATTAGGCACCGACCAGTGGGAGAAAGCGCGCCGCCGCGCCATGCAGGCGGCGCGCGACACCGCCGCCGAGCTGCTGAACCTGTACGCGCTGCGCGCGGCGCGCGAGGGCCATGCCTTCAAGTTTTCAATGCACGATTACGAGGCCTTCGCCGAGGGCTTCGGCTACGAGGAAACGCCGGACCAGGCCGCCGCGATCACGGCTGTCATGGCCGACATGCAGTCGGGCAAGCCGATGGACCGGCTGGTGTGCGGCGACGTCGGCTTCGGCAAGACCGAGGTCGCGTTGCGCGCTGCCTTCATGGCGGTGATGGGCGGCTACCAGGTGGCGGTGCTGGTGCCGACCACGCTGCTGGCCGAGCAGCACTTCAACAATTTCTCCGACCGCTTCTCGGCCTGGCCGGTGAAGCTGGCCGAACTGTCGCGCTTTCGCAGCCCGAAGGAGCAGGCCGAGGCGCTCAAGGCGCTGGCGGACGGCAAGCTCGACATCGTCATCGGCACCCACCGGCTGATCCAGAAGGACGTCAAATTCGCCCGCCTGGGGCTGGTGATCCTGGACGAAGAGCACCGCTTCGGCGTGCGCCAGAAGGAGCAGCTGAAGGCCTTGCGCGCCGAGGTGGATGTGCTGACGCTGACCGCCACGCCGATCCCGCGCACGCTGGCGATGTCGCTCGAAGGCATCCGCGATTTCTCGGTGATCGCCACCGCGCCGCAGAAGCGGCTGGCGATCAAGACCTTCGTCCAGCCGTTCTCCACCGGGCTGATCCGCGAGGCCGTGCTGCGCGAACTCAAGCGCGGCGGCCAGGTATATTTCCTGCATAACGAAGTCAGCACCATCCAGAACATGCACGAACGGCTGGAAAAGCTGCTGCCGGAAGCCCGCATCCGCGTCGGCCACGGCCAGATGGGCGAACGTGAACTCGAACAGGTAATCCGCGACTTTTACCAGCAGCGCTACGACATCCTGTTGTGCACCACCATCATCGAGACCGGCATCGACATCCCGACTGCCAACACCATCCTGATCAACCGCGCCGACAAGTTCGGCCTCGCCCAATTGCACCAGTTGAGGGGCCGCGTCGGGCGCTCGCACCACCAGGCCTTCGCCTACCTGCTGCTGGACGAGGACCGCACGCTGACGCCGCAGGCGAAGAAACGCCTGGAAGCGATCCAGTTGATGGAGGAGCTGGGTGCCGGCTTCCATCTCGCCATGCAGGACCTGGAAATCCGCGGCGCCGGCGAGGTACTGGGCGAGAAGCAGAGCGGGGAAATCCTCGAAGTCGGCTTCTCGCTCTACAACGACATGCTGTCCACTGCGGTGGCAAGCCTGAAGGCCGGCAAGGAACCGGACATGAACCAACCGCTCGGGGTGGTGTCCGAGATCAACCTGCACCTGCCCGCGCTGCTGCCGGTGGATTACTGTCCCGACGTGCACGAGCGGCTGGTGCTGTACAAGCGGCTGGCGAGTTGCCAGACCCCGGACGAGCTGACGCAGATGCAGGAGGAACTGGTCGATCGTTTTGGCGAGCTGCCCGATACGGCGCGCGCCCTGCTGGCGGTGCATCGCCTGCGCATGTCGACCCGCGCTTACGGCATTGTCCGGCTGGACGTGTCCGGCGAGGGCATGAGCGTGCAATTCGTCCCCAACCCGCCCATCGATCCGGGTAAAATTATTCAATTGATCCAGGGCAAGGCCGGATACCGGCTCGCCGGTCCCGACCGGCTGAAACTGACCACGCCACTGCCCGATGTCGCCCGGCGTGCCGGTGCAGTGAACGCCTTCCTGGCCGCATTGGGCCAACCCCTGGGCGAACCCCTTACCTCTGCAAAATAG
PROTEIN sequence
Length: 621
GAGEGAAPLHKLGTDQWEKARRRAMQAARDTAAELLNLYALRAAREGHAFKFSMHDYEAFAEGFGYEETPDQAAAITAVMADMQSGKPMDRLVCGDVGFGKTEVALRAAFMAVMGGYQVAVLVPTTLLAEQHFNNFSDRFSAWPVKLAELSRFRSPKEQAEALKALADGKLDIVIGTHRLIQKDVKFARLGLVILDEEHRFGVRQKEQLKALRAEVDVLTLTATPIPRTLAMSLEGIRDFSVIATAPQKRLAIKTFVQPFSTGLIREAVLRELKRGGQVYFLHNEVSTIQNMHERLEKLLPEARIRVGHGQMGERELEQVIRDFYQQRYDILLCTTIIETGIDIPTANTILINRADKFGLAQLHQLRGRVGRSHHQAFAYLLLDEDRTLTPQAKKRLEAIQLMEELGAGFHLAMQDLEIRGAGEVLGEKQSGEILEVGFSLYNDMLSTAVASLKAGKEPDMNQPLGVVSEINLHLPALLPVDYCPDVHERLVLYKRLASCQTPDELTQMQEELVDRFGELPDTARALLAVHRLRMSTRAYGIVRLDVSGEGMSVQFVPNPPIDPGKIIQLIQGKAGYRLAGPDRLKLTTPLPDVARRAGAVNAFLAALGQPLGEPLTSAK*