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FFSP_072018_bottom_0_1um_scaffold_768_6

Organism: FFSP_072018_bottom_0_1um_Hydrogenophilales_64_54

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(3454..7653)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 94.5
  • Coverage: 1399.0
  • Bit_score: 2601
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.5
  • Coverage: 1399.0
  • Bit_score: 2601
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Thiobacillus denitrificans RepID=UPI00035F6840 similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 1399.0
  • Bit_score: 2628
  • Evalue 0.0

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4200
ATGAAAGCACTGTTGGATCTATTCAAGCAGGCCACCCACGAGGAAGAATTCGACGCCATCAAGATTGGCCTGGCGTCGCCGGAGAAAATCCGTTCCTGGTCGTACGGCGAAGTGAAGAAGCCGGAGACCATCAACTACCGCACCTTCAAGCCGGAGCGCGATGGCCTGTTCTGCGCCAAGATTTTCGGTCCGGTGAAGGACTACGAGTGTCTGTGCGGCAAATACAAGCGCTTGAAGCATCGCGGCGTGATCTGCGAAAAATGCGGCGTCGAAGTGACGCTGTCCAAGGTGCGCCGCGAGCGCATGGGCCATATCGAACTGGCCTCGCCGGTCGCCCACATCTGGTTCCTGAAGTCGCTGCCGTCGCGTCTGGGCATGGTGCTCGACATGACGCTGCGCGACATCGAGCGCGTGCTCTATTTTGAAGGCTTCATGGTGGTCGAGCCCGGCATGACGCCGCTCAACCGCGGCCAGCTGCTGACCGAGGAAGACTACCTGGCCAAGCTGGAAGAATATGGCGATGAATTCAAGGCACTGATGGGGGCGGAAGCCGTGCGCGAACTGCTGCGCTCGCTCGATCTGCACACCACCGTCGAAAGCCTGCACGCGGAAATCAACAAGACCGGTTCCGATACCAAGCTGAAGAAGCTGTCGAAGCGGCTGAAGATCCTCGAAGGTTTCCAGAAATCCGGCATCAAGCCCGAGTGGATGATCCTCGAAGTGCTGCCGGTGCTGCCGCCCGAACTGCGCCCGCTGGTGCCGCTCGACGGCGGCCGCTTCGCCACCTCCGACCTCAACGACCTCTACCGCCGCGTCATCAACCGCAACAACCGCCTCAAGCGGCTGCTGGAACTGAAGGCGCCCGAGATCATCGTGCGCAATGAAAAACGCATGCTGCAGGAAGCAGTCGATTCGCTGCTCGACAACGGCCGTCGCGGCAAAGCGATGACCGGCGCCAACAAGCGCCCGCTGAAGTCGCTGGCCGACATGATCAAGGGCAAGAGCGGTCGTTTCCGCCAGAACCTCCTGGGCAAGCGCGTCGACTACTCCGGCCGTTCGGTCATCGTGGTGGGCCCGACCCTGAAGCTGCATCAGTGCGGCCTGCCGAAAAAGATGGCGCTTGAACTGTTCAAGCCTTTCATCTTCAATCGACTCGAAGCACTGGGACTGGCGACCACGATCAAGGCCTCCAAGAAGATGGTGGAGGACGAAGAGCCGGTCGTGTGGGATCTGCTGGAAGAAGTCATCCGCGAGCATCCGGTGATGCTGAACCGCGCACCGACGCTGCACCGCCTGGGCATCCAGGCGTTCGAGCCGGTGCTGATCGAAGGCAAGGCGATCCAGCTGCATCCGCTGGTGTGCGCGGCGTTCAACGCCGACTTCGACGGTGACCAGATGGCCGTCCACGTGCCGCTGTCGCTGGAAGCGCAGACCGAAGCCCGCACCCTGATGCTGGCGTCGAACAACGTGCTGTCGCCCGCCAACGGCGAGCCGATCATCGTGCCGTCGCAGGACATCGTGCTGGGCCTGTACTACATGACGCGCGAGAAGGTCAACGCCCGTGGCGAAGGCATGTTGTTTGCCGACGTCACCGAAGCGCGTCGCGCCTACGACACCCGCGAGGCCGAACTGCATGCACGCGTCACGGTTCGCATCAAGGAAGTGACCCTGGACGAGAACAAGAATCGGCTCGAGACCGTCAAGCGGGTGGAAACCACGCTGGGCCGTGCGCTGCTGTCCGAAATCCTGCCGCCGGGGCTGCCGTTCAGCTTCATCGACAAGGTGCTGAAGAAAAAGGAAATTTCCAAGCTGATCAACGCCAGCTTCCGCCGCTGCGGCCTGCGCGAGACGGTTATTTTCGCCGACAAGCTGATGTACACCGGCTTCACCTTCGCCACCCGTTCAGGGATGTCGATTGCGGTCAAGGACATGCTGATCCCCGTCGAGAAGGGGCAGATCCTGGGCGCGGCCGAAGCCGAGGTGAAGGAAATCGAGTCGCAGTACACCTCGGGTCTGGTGACCCAGGGCGAGCGCTACAACAAGGTGGTCGACATCTGGGGCCGCGCCGGCGACGCCGTGGCCAAGGCCATGATGGGCCAGCTTGGCGGCGAAAAAGTCGTCGACCGCCACGGCAAGGAAGTCACCCAGGAATCGTTCAACGCGATTTACATGATGGCCGACTCGGGCGCGCGCGGCTCCGCTGCGCAGATTCGCCAGCTGGCCGGCATGCGCGGCCTGATGGCGAAGCCGGATGGCTCCATCATCGAGACGCCGATCACGGCGAACTTCCGTGAAGGCCTGAACATGCTGCAGTACTTCATCTCGACCCACGGCGCCCGTAAGGGCCTGGCCGATACCGCGCTGAAAACCGCGAACTCCGGCTACCTGACGCGCCGACTGGTCGACGTGACGCAGGATCTGGTGGTGACCGAGGACGATTGCGGCACCAAGAACGGCCTCGTGGTGAAAGCGCTGATCGAAGGGGGTGAAGTTGTGGAACCGCTGCGCGAACGGATTCTCGGACGTGTGGCTGCCGGCGACATCATCAACCCGGAAACCCAGGAGACCGTGTTCGAAGCCGGCACCTTGCTGGTCGAAGACGTGGTCGACATCATCGAGTCGCTCGGCATCGACGAAGTCAAGGTACGCACGCCGCTGACCTGCGAAACGCGCTACGGCCTGTGTGTCAGCTGCTATGGCCGCGACCTTGGCCGCGGCTATCTGATCAACGTCGGCGAAGCGGTCGGCGTGATTGCCGCCCAGTCGATCGGCGAGCCGGGTACCCAGCTCACCATGCGGACCTTTCACATCGGTGGTGCGGCATCGCGTGCCGCGGCAGCCAGCCAGCTCGAGGCCAAGTCCAACGGCACGGTGCAGTACACCGCCACCATGCGCTACGTGACCAATGCCCGCAAGGAACTGGTTGCGATTTCGCGCAGCGGCGAGATCCTCATCGCGGATGATGCCGGCCGCGAGCGCGAGCGTCACAAGGTGCCCTATGGTGCGACGCTGATGGCGACCGACGGCGCCAGGATCAAGGCCGGCGCCGTGCTGGCGATGTGGGATCCGCACACACGGCCGATCATCACCGAATACGCCGGACGCATCCACTTCGAGAACATCGAAGAGGGCGTCACCGTGGCCAAGCAGCTCGACGACGTCACGGGCCTGTCCACCCTGGTGGTGATCGATCCCAAGCGCAAGGTCAGCAGCGCCGGCAAGGGTCTGCGTCCGCAGGTCAAGCTGCTGGACGAGGCTGGCAATGAACTCAAACTGGCTGGAACCGAAACGCTGGTCAACATCACCTTCCAGATCGGCTCCATCATCACCGTGAAGGATGGCCAGGACGTGGCGGTGGGCGACGTGATCGCGCGTATTCCGCAGGAAACCTCGAAGACGCGCGACATTACCGGCGGTCTGCCGCGTGTTGCCGAGCTGTTCGAAGCACGTTCGCCGAAAGATGCCGGCGTATTGGCAGAAGTTACCGGCACGGTCTCCTTCGGCAAGGACACCAAGGGCAAGCAGCGTCTGGTCATCACCGACCTCGACGGGGCGGCAAACGAGTATCTGATCACCAAGGAAAAGCACGTGACGGCGCACGACGGCCAGATCGTCCAGAAGGGCGAAATCATCGTCGATGGCCCGGTCGATCCGCACGACATCCTGCGCCTGCGCGGAGTTGAGGCGCTGGCGCGCTACATCACCGACGAAGTGCAGGACGTGTACCGCCTGCAGGGCGTGAAGATCAACGACAAGCACATCGAGGTGATCGTGCGCCAGATGCTGCGCCGCGTCACGGTCGCCGATCCGGGCAGCACAGGCCTCATCCCCGGCGAGCAGATCGAGCGTTCGGAAGTGCTGCAGATCAACGACGACATGGTGGCGGCCGGCAAGGAGCCTGCGGTCTACGATCCGATTCTGCTCGGCATCACCAAGGCATCGCTGTCGACCGATTCGTTCATCTCGGCGGCTTCCTTCCAGGAAACCACGCGTGTTCTGACCGAGGCGGCCATCATGGGCAAGCGCGACGAACTGCGCGGACTCAAGGAAAACGTGATTGTCGGACGCCTGATCCCGGCGGGAACCGGTCTGGCCTTCCATAACACCCGGCGCCGCCAGGCTGCAGGGGAAGACCTTGGGGCCGGGCATCTGATCGAAGACGGGGACGTGAACCCTGCCGAGAATCAGGAAGTCGCTTGA
PROTEIN sequence
Length: 1400
MKALLDLFKQATHEEEFDAIKIGLASPEKIRSWSYGEVKKPETINYRTFKPERDGLFCAKIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTLSKVRRERMGHIELASPVAHIWFLKSLPSRLGMVLDMTLRDIERVLYFEGFMVVEPGMTPLNRGQLLTEEDYLAKLEEYGDEFKALMGAEAVRELLRSLDLHTTVESLHAEINKTGSDTKLKKLSKRLKILEGFQKSGIKPEWMILEVLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRMLQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKSGRFRQNLLGKRVDYSGRSVIVVGPTLKLHQCGLPKKMALELFKPFIFNRLEALGLATTIKASKKMVEDEEPVVWDLLEEVIREHPVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQTEARTLMLASNNVLSPANGEPIIVPSQDIVLGLYYMTREKVNARGEGMLFADVTEARRAYDTREAELHARVTVRIKEVTLDENKNRLETVKRVETTLGRALLSEILPPGLPFSFIDKVLKKKEISKLINASFRRCGLRETVIFADKLMYTGFTFATRSGMSIAVKDMLIPVEKGQILGAAEAEVKEIESQYTSGLVTQGERYNKVVDIWGRAGDAVAKAMMGQLGGEKVVDRHGKEVTQESFNAIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNMLQYFISTHGARKGLADTALKTANSGYLTRRLVDVTQDLVVTEDDCGTKNGLVVKALIEGGEVVEPLRERILGRVAAGDIINPETQETVFEAGTLLVEDVVDIIESLGIDEVKVRTPLTCETRYGLCVSCYGRDLGRGYLINVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAASQLEAKSNGTVQYTATMRYVTNARKELVAISRSGEILIADDAGRERERHKVPYGATLMATDGARIKAGAVLAMWDPHTRPIITEYAGRIHFENIEEGVTVAKQLDDVTGLSTLVVIDPKRKVSSAGKGLRPQVKLLDEAGNELKLAGTETLVNITFQIGSIITVKDGQDVAVGDVIARIPQETSKTRDITGGLPRVAELFEARSPKDAGVLAEVTGTVSFGKDTKGKQRLVITDLDGAANEYLITKEKHVTAHDGQIVQKGEIIVDGPVDPHDILRLRGVEALARYITDEVQDVYRLQGVKINDKHIEVIVRQMLRRVTVADPGSTGLIPGEQIERSEVLQINDDMVAAGKEPAVYDPILLGITKASLSTDSFISAASFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGLAFHNTRRRQAAGEDLGAGHLIEDGDVNPAENQEVA*