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FFSP_072018_bottom_0_1um_scaffold_3992_9

Organism: FFSP_072018_bottom_0_1um_Hydrogenophilales_64_54

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(5434..6693)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 419.0
  • Bit_score: 783
  • Evalue 1.00e-223
transcription termination factor Rho n=1 Tax=Thiobacillus denitrificans RepID=UPI00036906AE similarity UNIREF
DB: UNIREF100
  • Identity: 96.2
  • Coverage: 419.0
  • Bit_score: 797
  • Evalue 5.00e-228
rho; transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 94.3
  • Coverage: 419.0
  • Bit_score: 783
  • Evalue 2.10e-224

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1260
ATGTATCTTTCCGAACTCAAGCAGAAACCGATCACCGAGCTTCTTGAACTTGCCGTCACCAACGGCATCGACAACGCCAACCGCTTTCGCAAGCAGGAACTGATCTTCGCCATCCTGAAAGCGGTGGCCAAGCGCGGCGAGAGCATCTACGGCGACGGCGTGCTGGAAGTGCTGCCGGACGGCTTCGGTTTCCTGCGTTCGCCGGAAGCCTCGTATCTGGCCAACACCGACGACATCTACGTGTCGCCGTCGCAGATCCGCCGCTTCAACCTGCACACCGGCGACAAGATCGAAGGCGAGATCCGCACCCCCAAGGACGGTGAACGCTATTCGGCGATGACCAAGCTCGACAAGATCAACGACGAGCCGCCCGAGGCCAGCAAGAACAAGATCCTGTTCGAGAACCTCACGCCGCTGCATCCCGACCAGCCGCTCAAGCTGGAACGCGACGTCAAGGCCGAGGAAAACATCACCAGCCGCGTGATCGACATCGTCGCCCCGATCGGCAAGGGCCAGCGCGGCCTCTTGGTGGCGCCGCCCAAGACCGGCAAGACGGTGATGCTGCAGCACATCGCCCACGCCATCACCTCCAACCACCCCGATGTCGTGCTGTTCGTGCTGCTGATCGACGAGCGCCCGGAAGAGGTGACCGAAATGAGCCGCACCGTGCGCGGCGAAGTCATCGCCTCCACCTTCGACGAACCCGCCAGCCGTCACGTGCAGGTGGCGGAAATGGTGATCGAGCGGGCCAAGCGCCTGGTCGAGCACAAGAAGGACGTGGTGATCCTGCTCGACTCGATCACCCGTCTGGCGCGCGCCTACAACGCCGTGCAGCCCGCCTCCGGCAAGGTGCTCACCGGCGGCGTCGACGCCAACGCGCTGCAGAAACCGAAGCGCTTCTTCGGCGCAGCACGCAACATCGAGGAAGGCGGCAGCCTCACCATCATCGCCACCGCGCTGGTCGACACCGGCAGCCGCATGGACGACGTGATCTACGAGGAATTCAAGGGCACCGGCAACCTCGAAATCCACCTCGACCGCAAGATGGCCGAGAAGCGCCAGTACCCCGCCATCAACGTCAACCGCTCCGGCACCCGCCGCGAAGAACTGCTGATGCCGCAAGACATCCTGCAGAAGGTGTGGGTGCTGCGGAAGCTGCTGTACCCGATGGACGACATGGAGGCGATGGAGTTTCTGCTGGACAAGATCCGTGCGACGAAAAACAACAGCGAGTTCTTCGACTCGATGCGGCGGGGTTGA
PROTEIN sequence
Length: 420
MYLSELKQKPITELLELAVTNGIDNANRFRKQELIFAILKAVAKRGESIYGDGVLEVLPDGFGFLRSPEASYLANTDDIYVSPSQIRRFNLHTGDKIEGEIRTPKDGERYSAMTKLDKINDEPPEASKNKILFENLTPLHPDQPLKLERDVKAEENITSRVIDIVAPIGKGQRGLLVAPPKTGKTVMLQHIAHAITSNHPDVVLFVLLIDERPEEVTEMSRTVRGEVIASTFDEPASRHVQVAEMVIERAKRLVEHKKDVVILLDSITRLARAYNAVQPASGKVLTGGVDANALQKPKRFFGAARNIEEGGSLTIIATALVDTGSRMDDVIYEEFKGTGNLEIHLDRKMAEKRQYPAINVNRSGTRREELLMPQDILQKVWVLRKLLYPMDDMEAMEFLLDKIRATKNNSEFFDSMRRG*