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FFSP_072018_bottom_0_1um_scaffold_1719_9

Organism: FFSP_072018_bottom_0_1um_Hydrogenophilales_65_12

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 3
Location: comp(7018..7872)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=501479 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source="Citreicella sp. SE45.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.6
  • Coverage: 131.0
  • Bit_score: 240
  • Evalue 2.20e-60
Transcription-repair-coupling factor n=1 Tax=Citreicella sp. SE45 RepID=D0D2H2_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 91.6
  • Coverage: 131.0
  • Bit_score: 240
  • Evalue 1.60e-60
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 91.6
  • Coverage: 131.0
  • Bit_score: 239
  • Evalue 1.00e-60

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Taxonomy

Citreicella sp. SE45 → Citreicella → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 855
CTCTATCAGATCCGGGGGCGCGTGGGGCGGTCCAAGACGCGGGCCTATGCCTATCTGACCACAAAACCGCGCGGCAAGCTGACACCTGCGGCCGAGAAACGCCTGCGGGTGCTGGGATCGCTGGATACACTGGGCGCGGGCTTCACGCTGGCCAGTCAGGATCTGGACATCCGCGGCGCGGGCAACCTCTTGGGCGAGGAACAGTCCGGCCAGATGCGCGATGTGGGATACGAGCTTTACCAGCAAATGCTGGAGGATGCGATTGCCAAGATCAAATCCGGCGAGATGGAGGGCCTGTCGGATCAGGATGGCCAGTGGGCCCCATCGATCAACCTTGGGGTGCCCGTGCTGATCCCCGAGGATTACGTGCCCGATCTGGCCGTGCGCATGGCTGCCCTGCCGGAGCCGGCGCCCGCCACCGAACCGCCGCCGCCCAAACCGGCCAGCGTGCCCGCGGCGCCTGTCCAGGCGCCCGCCAAAGCCGGGCCTGTGGCCAAAGCCGAACCCGCCGCAGCGTCGCCGGCCAGGCCCGAGCCCCCCAAAATCGAACCGCCCAAGCCGGCGCCCGTCACAGCCGAACCGGCGCCGGCGGCGCCCAGGCCTGCGCCTGCCAAGCCCGCAGCCAAGCCGGCCGCCGAGCCCTATGTGGTCCAGCTGGCCGCCCTGTCCGACGCCGCCAAGGCCGAGGCGCTCAAGACGCGCGCGGCGGCCATGGGCCTGCCGGCCTACACCGATACGCTGGGCAAGCTGACGCGCGTGCGCATCGGCCCGTTTGCGACGCGCGAAGCGGCGGTGGCCGCAGCCGTGAAGCTGGCCGAAAACGGCATGACGACCGCCCAGGTTGTCGCGAAGTGA
PROTEIN sequence
Length: 285
LYQIRGRVGRSKTRAYAYLTTKPRGKLTPAAEKRLRVLGSLDTLGAGFTLASQDLDIRGAGNLLGEEQSGQMRDVGYELYQQMLEDAIAKIKSGEMEGLSDQDGQWAPSINLGVPVLIPEDYVPDLAVRMAALPEPAPATEPPPPKPASVPAAPVQAPAKAGPVAKAEPAAASPARPEPPKIEPPKPAPVTAEPAPAAPRPAPAKPAAKPAAEPYVVQLAALSDAAKAEALKTRAAAMGLPAYTDTLGKLTRVRIGPFATREAAVAAAVKLAENGMTTAQVVAK*