ggKbase home page

FFSP_072018_bottom_0_1um_scaffold_2295_4

Organism: FFSP_072018_bottom_0_1um_Hydrogenophilales_65_12

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 3
Location: comp(1972..5109)

Top 3 Functional Annotations

Value Algorithm Source
Heavy metal efflux pump CzcA n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJ81_THIDA similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 1047.0
  • Bit_score: 1905
  • Evalue 0.0
heavy metal efflux pump CzcA similarity KEGG
DB: KEGG
  • Identity: 92.9
  • Coverage: 1047.0
  • Bit_score: 1905
  • Evalue 0.0
Heavy metal efflux pump CzcA {ECO:0000313|EMBL:AAZ97286.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 1047.0
  • Bit_score: 1905
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3138
ATGATCGCCCGGCTCATCCACTGGTCGGCGGCCAACCGCTTCCTGGTTCTGCTGGCGACGCTGTTCACCGTGGCCTGGGGCGTGTGGTCGGTGAAGACCACGCCGATCGACGCGCTGCCCGACCTGTCCGACGTGCAGGTCATCATCCGCACCGCGTATCCGGGGCAGGCGCCGCAGATCGTCGAAAATCAGGTGACCTATCCGCTCGCCACCACCATGCTGTCGGTGCCGGGCGCGAAGACGGTGCGCGGGTTCTCCTTTTTCGGCGACAGCTTCGTCTACGTCATTTTCGAGGACGGCACCGATCTCTACTGGGCGCGCTCGCGGGTGCTGGAATATCTCAGCCAGGTGCAGGCCCGGCTGCCGGCGACGGCCAGGCCGGCGCTCGGCCCCGATGCCACCGGGGTGGGCTGGATTTACCAGTACGCACTGGTCGACCGCACCGGCAAGCACGACCTGGCGCAGCTGCGCAGCCTGCAGGACTGGTTCCTCAAGTACGAGCTGAAAACCCTGCCCAACGTCGCCGAAGTGGCCACCGTCGGCGGCATGGTCAAGCAATACCAGGTGGTGCTCGATCCGGTGAAACTCGCCAGCTTCGGCATCACCCATGACGCGGCGATCGCGGCGATCCGCGCGGCCAACCAGGAGACCGGCGGCGCGGTGCTGGAGCTTGCCGAAACCGAATTCATGGTGCGCGCCAGCGGCTATCTCGAGAGCGTGGCCGATTTTCGCGCCATTCCGCTCAAGCTGGCTGGGACGACGCCGGTGAGCCTGGGCGACGTGGCGCACATCCAGCTCGGCCCCGAGATGCGGCGCGGCATCGGCGAGCTCGACGGCGAAGGCGAGGCGGTCGGCGGCATCGTGGTGCTGCGCTCGGGCAAGAACGCGCGCGCGACTATCGCGGCGGTCAAGACCAGGCTCGACACGCTCAAGGCCAGCCTGCCGCCCGGCGTCGAAATCGTGCCGACCTACGACCGCAGCCTGTTGATCGACCGCGCGATCGACAACCTGACGCACAAGCTGATCGAGGAATTCATCGTGGTGGCGCTGGTGTGCGCGCTCTTCCTGTGGCACCTGCGCTCGTCGCTGGTGGCCATCGTTTCGCTGCCGCTGGGGGTGCTGATCGCCTTCATCGTCATGCGCCAGCAGGGGGTCAACGCGAACATCATGTCGCTCGGCGGCATCGCCATCGCCATCGGTGCCATGGTCGACGCGGCGGTGGTGATGATCGAAAACGCACACAAGAAAATCGAGGCGTGGAACCATGTGCATCCCGGCGAAACGCTGACAGGCGAGACGCACTGGAAGGTGGTGACCGACGCGGCGACCGAGGTCGGCCCGGCGCTGTTCTTTTCGCTGCTGATCATCACGCTGTCCTTCATTCCGGTGTTCACGCTGGAAGCGCAGGAAGGGCGCCTGTTCGGCCCGCTGGCCTTCACCAAGACCTATGCCATGGCGGCCGCCGCCGGCCTGTCGGTGACCTTGATCCCGGTGCTGATGGGCTACTGGATACGCGGAAAAATTCCCGACGAGAGCAGGAACCCGCTCAACCGCTGGCTGATCCGCGCCTACCATCCGCTGCTGCAAGCCGTGCTCAGGCACCCCAAAACGACGCTCGTAGTCGCCGCGCTGATTTTCCTCACCGCACTGTGGCCGATGAGCCGCCTGGGGGGCGAATTCCTGCCGCCGCTGGACGAGGGCGATCTGCTCTACATGCCGTCGGCCTTGCCTGGGCTGTCGGCGCAAAAGGCATCCGAACTGTTGCAGCAGACCAACCGCATGATCAGGAGCGTGCCCGAAGTGGCCCGCGTCTACGGCAAGGCCGGGCGCGCCGAAACCGCCACCGATCCGGCGCCGCTGGAAATGTTCGAGACTACCATCCAGTTCAAGCCGCGCGAGGCATGGCGCCCGGGCATGACACCGGAGAAACTGATCGACGAGCTCGACCGCACAGTCAAGGTGCCGGGGCTCGCCAACATCTGGATCCCGCCGATCCGCAACCGCATCGACATGCTCGCCACCGGCATCAAGAGCCCGGTCGGGGTCAAGATCGCCGGCAGCAATCTGGCCGATATCGACCGCATCGCGCAGGACGTCGAGCGCATCGCGAAAACCGTTCCCGGCGTATCGTCAGCGCTGGCCGAGCGACTCACCGGCGGCCGCTACATCGACGTCGACATCGATCGTGCCACCGCGGCGCGCTATGGCATGAACATCGGCGACGTGCAGTCGGCGGTGGCCAACCTCATCGGCGGCGAGAACATCGGTGAGACAGTCGAGGGACTGGCGCGCTATCCGATCAACGTGCGCTACCCGCGCGAATGGCGCGACACGCCCGACAAGCTTGCCGCGCTTCCCATCCTCACGCCGAACGGCAGCCAGATCACGCTCGGCACGGTGGCACGCGTCAAGGTCAGCGACGGGCCGCCGATGCTGAAAAGCGAGAACGCGCGGCCTTCGGGCTGGGTCTACGTCGACGTGCGCGGGCGCGACCTCGCGTCCACCGTGGCCGATCTTCAGGCCGCCGTGTCGGCTGAAGTCAAGCTGGAACCCGGCATGAGTCTCGCCTATTCCGGTCAGTTCGAGTTCATGGAACGCGCCAACGCGCGGCTCAAGCTCGTCGTGCCCGCCACGCTGCTGATCATCTTCGTGCTGCTCTACCTCACCTTCAGTCGATTCGACGAAGCCGTGCTCATCATGGCCACGCTGCCGTTTGCGCTCACCGGCGGGGTGTGGTTCCTCTACGCCATGGGCTACCAGCTGTCGGTCGCCACCGGCGTCGGCTTCATCGCGCTGGCCGGGGTGTCGGCCGAGTTCGGCGTCATCATGCTGCTGTACCTGAAAAACGCCTGGGACGCGAAACAAGCCGCCGGCAAAACCGGCGAGGCCGGTCTGCTGGACGCCATCCGCGAAGGCGCGGTGCAGCGCGTGCGCCCGAAGGCGATGACAGTGGCGGTAATCGTGGCCGGCCTGCTGCCCATTCTATTGGACAGCGGCACCGGCAGCGAGGTCATGAGTCGCATCGCCGCCCCCATGGTCGGCGGTATGGTAAGCGCGCCTCTGCTGTCGCTGTTTGTCGTCCCGGCAGCCTACCTGCTGATGCGCCGTCCTAGGAAAATCCCCCGCCGTGCCGGGTGA
PROTEIN sequence
Length: 1046
MIARLIHWSAANRFLVLLATLFTVAWGVWSVKTTPIDALPDLSDVQVIIRTAYPGQAPQIVENQVTYPLATTMLSVPGAKTVRGFSFFGDSFVYVIFEDGTDLYWARSRVLEYLSQVQARLPATARPALGPDATGVGWIYQYALVDRTGKHDLAQLRSLQDWFLKYELKTLPNVAEVATVGGMVKQYQVVLDPVKLASFGITHDAAIAAIRAANQETGGAVLELAETEFMVRASGYLESVADFRAIPLKLAGTTPVSLGDVAHIQLGPEMRRGIGELDGEGEAVGGIVVLRSGKNARATIAAVKTRLDTLKASLPPGVEIVPTYDRSLLIDRAIDNLTHKLIEEFIVVALVCALFLWHLRSSLVAIVSLPLGVLIAFIVMRQQGVNANIMSLGGIAIAIGAMVDAAVVMIENAHKKIEAWNHVHPGETLTGETHWKVVTDAATEVGPALFFSLLIITLSFIPVFTLEAQEGRLFGPLAFTKTYAMAAAAGLSVTLIPVLMGYWIRGKIPDESRNPLNRWLIRAYHPLLQAVLRHPKTTLVVAALIFLTALWPMSRLGGEFLPPLDEGDLLYMPSALPGLSAQKASELLQQTNRMIRSVPEVARVYGKAGRAETATDPAPLEMFETTIQFKPREAWRPGMTPEKLIDELDRTVKVPGLANIWIPPIRNRIDMLATGIKSPVGVKIAGSNLADIDRIAQDVERIAKTVPGVSSALAERLTGGRYIDVDIDRATAARYGMNIGDVQSAVANLIGGENIGETVEGLARYPINVRYPREWRDTPDKLAALPILTPNGSQITLGTVARVKVSDGPPMLKSENARPSGWVYVDVRGRDLASTVADLQAAVSAEVKLEPGMSLAYSGQFEFMERANARLKLVVPATLLIIFVLLYLTFSRFDEAVLIMATLPFALTGGVWFLYAMGYQLSVATGVGFIALAGVSAEFGVIMLLYLKNAWDAKQAAGKTGEAGLLDAIREGAVQRVRPKAMTVAVIVAGLLPILLDSGTGSEVMSRIAAPMVGGMVSAPLLSLFVVPAAYLLMRRPRKIPRRAG*