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RTP_03222018_0_2um_scaffold_5806_1

Organism: RTP_03222018_0_2um_Betaproteobacteria_48_16

partial RP 38 / 55 BSCG 40 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(140..2074)

Top 3 Functional Annotations

Value Algorithm Source
capD; polysaccharide biosynthesis protein (EC:4.2.1.46) similarity KEGG
DB: KEGG
  • Identity: 72.9
  • Coverage: 641.0
  • Bit_score: 918
  • Evalue 8.40e-265
Polysaccharide biosynthesis protein n=1 Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8IUF9_HERSS similarity UNIREF
DB: UNIREF100
  • Identity: 72.9
  • Coverage: 641.0
  • Bit_score: 918
  • Evalue 3.00e-264
Polysaccharide biosynthesis protein CapD {ECO:0000313|EMBL:KDB08734.1}; TaxID=1192124 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. lig30.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.6
  • Coverage: 641.0
  • Bit_score: 921
  • Evalue 6.40e-265

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Taxonomy

Burkholderia sp. lig30 → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1935
ATGATCCGTTTGTTAAGCCGTCTTGCGACAATTGTTCTGGCTTTACCTCGTTCAATTAAGCGCGGTGTTGCGTTGGGTGTTGATGCTGGGCTATGTGTGCTGACTGTCTGGCTAGCTTTTTACCTTCGCTTGGGAAATTTTCCTCCGCTATCGGGGCCACCTCTGTTGGTAATTTTGGCCTCTACTGTGCTCGCGTTACCTCTTTTTATCAAGTCAGGTCTTTACCGAGCCATCTTTCGTTATAGCGGTATGCCGGCCATGATGGCTGTCGTTCGGGCGCTATTGCTTTACGGCGTAGCGTTTGCAGCTATCTTTACTTTTTATGGTGTAGAGGGCGTGCCACGCACAGTGGGACTAATCCAGCCCATATTGTTGTTGCTATTTGTGGGAGCCTCACGCGCGGCAGTTCGGATCTGGCTGGGAGCAGGTTATTACCAACAGCTTCGGAAAGCTTCATTGCCTCAAGTGTTGATTTATGGTGCGGGCAGTGCGGGTCGCCAATTGGCCTCGGCAATGGCAAACAGTCCCGAGATGAGTGTGGTCGGTTTTTTAGACGATGATGACCGCTTGCATGGAAATGTGCTTAATGGATTGACAATTCATAATCCTGTAGATTTGGTTGAGATTCTAGTAGAAGTACCAGTTACAGATGTTCTTCTTGCGTTGCCCTCCGTAACTCGCCAGCGGAGAAATGAAATACTACGTTCCCTCGGTCAGCACCAGATCGCTGTGCGAACCCTACCGAGCCTTAGTGACATTGCCACGGGTAAAGTAAGCTTGAGTGATGTGCATGATCTCGACTTAGACGATCTTCTGGGGCGTGAGCCAGTCACTCCTAACCATATTCTTTTAGCAAAAAACATAGTTAATAAAGTCGTTTTAGTGACTGGTGCGGGCGGTTCTATAGGCAGCGAGCTTATCCGTCAAATTTTAGCTGTTGGACCTTCTAAGTTGTTACTGATTGAGCAGAGCGAATTTGCTCTTTATACAATTCATCAAGAACTTGAAGAAAAGCAGCCAGACAAGAAAACCATTCTGATTCCCCTACTGGCTTCAGTGCAGGATGCTCGGCGGATGCTCGAGATCATGTCCACGTGGTGCCCTGACACGGTTTATCACGCTGCAGCATACAAACATGTGCCATTAGTTGAACATAACCCTGCAGAAGGCATTAGGAATAATGTATTGGGTACTTTGCGTACAGCACAAGCGGCTGTATCAACAGGTGTCCGTGATTTTGTCCTCATCAGCACTGACAAAGCTGTGCGACCAACCAACATCATGGGAGCTAGCAAGCGACTTGCTGAGATGACGCTGCAGGCGCTGTCTGCATCAAATCCTAAAACTAATTTTTCGATGGTGCGCTTTGGTAACGTTCTGGGATCTTCGGGGTCGGTTGTACCCAAGTTCCGTCAACAAATTCGCGACGGTGGACCGATCACCCTGACCCATGCTGAAATCACTCGGTATTTCATGACCATTCCTGAAGCCGCGCAGCTAGTGATTCAGGCTGGAGCCATGAGTAAAGGGGGCGATGTGTTCGTCCTTGATATGGGCGAGTCGGTCAAGATTATTGACTTGGCTCGCAGGATGGTTGAGCTTTCAGGTCTGTCAGTCAAAGACGATCTCAATCTAAATGGTGATATTGAAATCGAGATTACTGGCTTACGTCCCGGTGAAAAGCTATATGAAGAACTCCTGATCGGCGACAACCCCCAGACTACGTTTCACCCGAGGATAATGAAAGCCAATGAAGATTTCATTCCTTGGGTCGAGTTAGAGGAGAGACTAAAATGTTTGGAAACCGCTCTTGATATCAACAATGCAAGAGTCATCCGTTTGATGATAGCTCAGCTAGTGCCCGGTTACACTCCGAATGAAAAAATAGTAGATTGGGTACTTATGGAGCTGGAAGCTGATGCAGGTCATGCTTAA
PROTEIN sequence
Length: 645
MIRLLSRLATIVLALPRSIKRGVALGVDAGLCVLTVWLAFYLRLGNFPPLSGPPLLVILASTVLALPLFIKSGLYRAIFRYSGMPAMMAVVRALLLYGVAFAAIFTFYGVEGVPRTVGLIQPILLLLFVGASRAAVRIWLGAGYYQQLRKASLPQVLIYGAGSAGRQLASAMANSPEMSVVGFLDDDDRLHGNVLNGLTIHNPVDLVEILVEVPVTDVLLALPSVTRQRRNEILRSLGQHQIAVRTLPSLSDIATGKVSLSDVHDLDLDDLLGREPVTPNHILLAKNIVNKVVLVTGAGGSIGSELIRQILAVGPSKLLLIEQSEFALYTIHQELEEKQPDKKTILIPLLASVQDARRMLEIMSTWCPDTVYHAAAYKHVPLVEHNPAEGIRNNVLGTLRTAQAAVSTGVRDFVLISTDKAVRPTNIMGASKRLAEMTLQALSASNPKTNFSMVRFGNVLGSSGSVVPKFRQQIRDGGPITLTHAEITRYFMTIPEAAQLVIQAGAMSKGGDVFVLDMGESVKIIDLARRMVELSGLSVKDDLNLNGDIEIEITGLRPGEKLYEELLIGDNPQTTFHPRIMKANEDFIPWVELEERLKCLETALDINNARVIRLMIAQLVPGYTPNEKIVDWVLMELEADAGHA*