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RTP_01242018_0_2um_scaffold_625_9

Organism: RTP_01242018_0_2um_Betaproteobacteria_47_58

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: 10590..11993

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane component of tripartite multidrug resistance system n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0ADJ1_COLFT similarity UNIREF
DB: UNIREF100
  • Identity: 43.8
  • Coverage: 468.0
  • Bit_score: 377
  • Evalue 1.00e-101
RND efflux system similarity KEGG
DB: KEGG
  • Identity: 44.1
  • Coverage: 467.0
  • Bit_score: 383
  • Evalue 7.00e-104
RND efflux system {ECO:0000313|EMBL:AIY43409.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.1
  • Coverage: 467.0
  • Bit_score: 383
  • Evalue 3.50e-103

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Taxonomy

Collimonas arenae → Collimonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1404
ATGATTCGATTTTATACGTTTCCTTATCTAGCTTTACTCAGCCTAGTAAGTGCTTGCAGCGTAGGACCAACTTATCACAGCCCACAGCCGTCGCTTGCTGCCAGTTGGCAAACACCTTTGCCGCATGATGGGCAAGTCAGCCAACTTGATAACTGGTGGACGCAGTACCACGATGCAACGCTGGTTCAGCTAATCGATACAGCCCAAACTGCCAGCCCCACATTACAGCAAGCCATCAGTCGCATAGCCCAGGCACGCGCAAACGGCGCAAGTATAGGTGCGAATTTATATCCATCACTGGACGCCAACGCCAAGTCCATCCACAGCAAGAGCAACCCATTTGGTACGCAGACGTTCATGCAAACTGCTAACAGCATCAGTCTGGATAGTGCATGGGAAATTGACTTGTTTGGTGCAAGCCGCAATGCGCGTACGGCTGCCATAGCACGACTAGATGCCCGTATTGCCAACTGGCACGAAGCCCGTATCAGCCTTGCAGCCGAAGTTGCCAATACGTATTTTAACCTGCGTGCCTGTGAAATAACCGCCCATACTACTCAGCAGGAATGGCAATCACGCACACTAACCACCTCCTTGACCCGGCTCAAATTTGCCCAACAATTCATTGCCAGTAGTGAAGTCGCGCTCGCCAATGCCAATACTCATGATGCACACAACCGCTACTTGAACCAACAAGCCGAATGTCTATTATTGCGCAAATCGTTAGTCGCGCTCACGGGTCAGGATGAAACTGCCCTTGCCACCCAACTTGCCGTTAACACGGCAAAACTGGCAAGTAGCCCTACACTCAACATCACCAGCGTGCCTGCCGATTTATTACGCCAACGACCTGACCTCAGTGCCGCTGAGCGCGACTTAGCTGCGGCCATGGGTGATGTAGGCATAGCCGAAGCTAACCGCTACCCGCGTATCACCCTTACCGGTTCAATTGGTATCGCCTGGCTCACCCTGAATGGTGCGAGCAGTCAATCCGATACATGGTCGTTCGGTCCCGCACTCAATATCCCCTTGTTCGATGCAGGTAAACGCCGCGCCAATGCCGAGTTGGCACTCGCAAAATACGACGAAGCCCGTGCAGGCTATGAATTAAAAGTACGAAATGCAGTAAAAGAAACCGAACAAGCCTTAGTACAGCTTGGTAGTACACGACAACGCTTAAATGATGCTTTAGGCAGCGTCAATAGCTATGCGCAAACTGTGCAAGCCTTGCAATTACGTTATCAAGCAGGTACAGCAAGCTTGCTGGAAGTAGAAGACAGTAAACGCAGTCTATTCAATGCCAAAAATACACTCACTACACTTCAGCGCGACCAACTCACCGCCAGCATTAACTTGTATAAAGCCATGGGTGGCGGCTACACATCGGCACATAAGCATGACTAA
PROTEIN sequence
Length: 468
MIRFYTFPYLALLSLVSACSVGPTYHSPQPSLAASWQTPLPHDGQVSQLDNWWTQYHDATLVQLIDTAQTASPTLQQAISRIAQARANGASIGANLYPSLDANAKSIHSKSNPFGTQTFMQTANSISLDSAWEIDLFGASRNARTAAIARLDARIANWHEARISLAAEVANTYFNLRACEITAHTTQQEWQSRTLTTSLTRLKFAQQFIASSEVALANANTHDAHNRYLNQQAECLLLRKSLVALTGQDETALATQLAVNTAKLASSPTLNITSVPADLLRQRPDLSAAERDLAAAMGDVGIAEANRYPRITLTGSIGIAWLTLNGASSQSDTWSFGPALNIPLFDAGKRRANAELALAKYDEARAGYELKVRNAVKETEQALVQLGSTRQRLNDALGSVNSYAQTVQALQLRYQAGTASLLEVEDSKRSLFNAKNTLTTLQRDQLTASINLYKAMGGGYTSAHKHD*