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RTP_01242018_0_2um_scaffold_764_5

Organism: RTP_01242018_0_2um_Betaproteobacteria_47_58

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(3250..4065)

Top 3 Functional Annotations

Value Algorithm Source
Putative lipopolysaccharide core biosynthesis glycosyl transferase LpsC {ECO:0000313|EMBL:CBI09583.1}; EC=2.-.-.- {ECO:0000313|EMBL:CBI09583.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.8
  • Coverage: 272.0
  • Bit_score: 474
  • Evalue 5.10e-131
Putative lipopolysaccharide core biosynthesis glycosyl transferase LpsC n=1 Tax=mine drainage metagenome RepID=E6QQR2_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 272.0
  • Bit_score: 474
  • Evalue 3.60e-131
lipopolysaccharide core biosynthesis glycosyl transferase (KdtX) similarity KEGG
DB: KEGG
  • Identity: 53.4
  • Coverage: 266.0
  • Bit_score: 286
  • Evalue 6.80e-75

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Taxonomy

mine drainage metagenome

Sequences

DNA sequence
Length: 816
ATGGAAAAACTATCTGCTTTTGTCACCACTTTTAACAATGAGCGCACCTTAACAAGTTGTCTGGAGAGCGTTAAATGGGCAGATGAAATTGTTTTACTGGATTCCGGTAGCACGGATAAAACGTTGGCAATCGCCGAACAATATGGTTGTAAAATTTTCCACCAGCCTTTTTTGGGCTACGGTAAACAAAAACAACTCGCGCTCACCAAAACCACGTATCTGTGGGTATTGTTACTGGATGCTGATGAAGCACTTTCTTTTGAAGCGCAACAAGAAATCCGCGACATACTTAATCAACCCACAGCAGATGGGTACGATATTCCCCGTTTAGAACAAATGTTCTGGCGTATGAATAATCCGCATACCCGCCTCAATAAATTTTTGCGCTTATTTCGCAAGGATAAAGGACATATTACTGACATGCCCATACACGCCGCGCCTAAAGTCGATGGTGTGATTAAAAGCCTGAACGCCGTATTTTACCACTATGGTGAAACGGATATTGATGTCAAAGTCAGTAAATTAAATGCCTATTCTACGGGATTGGTAAAAGATAAAGTAGCCAAAGGCACTCGCGCTAATCCCTGGATGCTGGTGTTCTACCCACCTTTTTATTTTTTACGTGCCTATTTTTTCAAGCGTGCTTTTATGAATGGCTGGGGTGGTTTTATCACTTCATTCTGCGGCGCATTTTATGTATTTTTGAAATATGCAAAATTGTATGAATATCATCAGCGCAAACGTTATGGTAAATCCATGATGCCGACGGGTGCACCTGATAATCCACCTGTTTATGAGTCCGACAAACCCTGCTAA
PROTEIN sequence
Length: 272
MEKLSAFVTTFNNERTLTSCLESVKWADEIVLLDSGSTDKTLAIAEQYGCKIFHQPFLGYGKQKQLALTKTTYLWVLLLDADEALSFEAQQEIRDILNQPTADGYDIPRLEQMFWRMNNPHTRLNKFLRLFRKDKGHITDMPIHAAPKVDGVIKSLNAVFYHYGETDIDVKVSKLNAYSTGLVKDKVAKGTRANPWMLVFYPPFYFLRAYFFKRAFMNGWGGFITSFCGAFYVFLKYAKLYEYHQRKRYGKSMMPTGAPDNPPVYESDKPC*