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RTP_01242018_0_2um_scaffold_764_12

Organism: RTP_01242018_0_2um_Betaproteobacteria_47_58

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(10176..10925)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000302202F similarity UNIREF
DB: UNIREF100
  • Identity: 47.6
  • Coverage: 254.0
  • Bit_score: 219
  • Evalue 1.90e-54
pilZ domain protein similarity KEGG
DB: KEGG
  • Identity: 49.2
  • Coverage: 246.0
  • Bit_score: 224
  • Evalue 2.20e-56
Flagellar brake protein YcgR {ECO:0000256|HAMAP-Rule:MF_01457}; Cyclic di-GMP binding protein YcgR {ECO:0000256|HAMAP-Rule:MF_01457}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.8
  • Coverage: 252.0
  • Bit_score: 224
  • Evalue 1.10e-55

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Taxonomy

Janthinobacterium lividum → Janthinobacterium → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 750
ATGCAAGTGAATCAGCCAGAACTCGGTACCGAAAATCAAAGTTTATACCAAGTCCATTCACGTCGTGAAATACTAAGTATCCTGCACGGCATACAAGATCAGCATCAATTGCTTAGCATGGTGATTAATGGCGGCGCAGAGGTCATCGTCACTTCCATTTTAGAAATCGATGAAAGCAACAACAAAATATACATCGACCGTGCATCCAGTGCCTTAATAAATCAGCGTGTGATTGAATCTGATGATATTGAGCTTTCGTCATCATTAGATAGAATCCGCATTTCTTTCTTTACTGCAGAAGTCACTGAATCCGAACAGGATCAACGTCCTGCGTTTTCAATGGCTATCCCCCCGGTATTAATTCGGCTGCAACGTCGCGAGTATTTTCGTGTTAATACGCCGGCTATAAATCCTGTTACCTGCAAGTTTATTTTGCCGACAGAGTTGCATCTTGCTCAAGTCGTTGATATTAGCGGTGGCGGTATTGCAATACTAGACGAAAAACACCTGCTTACAACAGAGGTCGGCTCTGAGTACCACCAGTGCCATATTAATTTGGGTGAGCATGGCACTATCGACACCACGCTACAAATTAGGAATAGCCAAGATTTCGCTTTAGGTACAGGCAAAGCCAATCGCCGCCTAGGATGTCAATTTATAGGGCTATCCCCTAGTATGCTAAATCAGGTACAACGTTACATTATGTACCTAGAGCGCGACCGTAACGCACGAATGACAGGGCTTATTTAA
PROTEIN sequence
Length: 250
MQVNQPELGTENQSLYQVHSRREILSILHGIQDQHQLLSMVINGGAEVIVTSILEIDESNNKIYIDRASSALINQRVIESDDIELSSSLDRIRISFFTAEVTESEQDQRPAFSMAIPPVLIRLQRREYFRVNTPAINPVTCKFILPTELHLAQVVDISGGGIAILDEKHLLTTEVGSEYHQCHINLGEHGTIDTTLQIRNSQDFALGTGKANRRLGCQFIGLSPSMLNQVQRYIMYLERDRNARMTGLI*