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RTP_01242018_0_2um_scaffold_1148_2

Organism: RTP_01242018_0_2um_Betaproteobacteria_47_58

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(2128..2913)

Top 3 Functional Annotations

Value Algorithm Source
Transmembrane protein n=1 Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8IZD6_HERSS similarity UNIREF
DB: UNIREF100
  • Identity: 61.7
  • Coverage: 261.0
  • Bit_score: 332
  • Evalue 3.70e-88
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 61.7
  • Coverage: 261.0
  • Bit_score: 332
  • Evalue 1.00e-88
Transmembrane protein {ECO:0000313|EMBL:ADJ62256.1}; TaxID=757424 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum seropedicae (strain SmR1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.7
  • Coverage: 261.0
  • Bit_score: 332
  • Evalue 5.20e-88

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Taxonomy

Herbaspirillum seropedicae → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 786
ATGATAAATACAGCACCTTCTTTGCTAGACAACAATACATCTTACACAGATTCCCCATTAGGTAATGAGCCTGCAATGAATTCAGCGCATAGCCTGATGGATCTGATGTATGACGGGTTCTATGCATTATTCCTGTTAAAAAACGGTAATGCCCCGAAAGACGAAACCAGCTTTGCGCGCAAGTTGCAGCAGTTTCTCAATACAGTCGAAATCAATGCCAAAAAACTAGGCGTGAGTGCTGAAGATATACATATGGCTAAGTATGCCTTTTGTGCCGCAGTTGATGAGATTGTGCTTCGGGCGAGTTTTAGCATAAGCGAATCCTGGTCTCGCCATCCATTGCAACTCGTGCTCTTTGGCGATCAGCTGGCCGGCGAACATTTCTTTATGCGGCTAGAGGAATTACGCAGCAAGGGTACGCCACATGTACAAGCGCTTGAAGTATTTCATATGTGTTTATTACTGGGATTTCAAGGCAAATATTTACTGGAGTCCCCGGAGAAGTTACATTATTTGACAGCCCGCCTCGGTGAGGAAATCGCGCATATCAAAGGCAAACCTGCCGTATTTGCACCGCACTGGGACAGACCAGACCAGGTTATCAATAAGTTACGCATGGAAACGCCATTATGGATTGTGGTCGCCATTTTTGCAGGGGTGGCAATGGCGATGTTTGCCGGTGTGAACCAGTTATTAACCCACCATGCGCAGACAACGATTGCAGGATATAACGACATTATCCAGATGGCACCTCACCCCGCCACTTTGATATTGACCTTGCCCTGA
PROTEIN sequence
Length: 262
MINTAPSLLDNNTSYTDSPLGNEPAMNSAHSLMDLMYDGFYALFLLKNGNAPKDETSFARKLQQFLNTVEINAKKLGVSAEDIHMAKYAFCAAVDEIVLRASFSISESWSRHPLQLVLFGDQLAGEHFFMRLEELRSKGTPHVQALEVFHMCLLLGFQGKYLLESPEKLHYLTARLGEEIAHIKGKPAVFAPHWDRPDQVINKLRMETPLWIVVAIFAGVAMAMFAGVNQLLTHHAQTTIAGYNDIIQMAPHPATLILTLP*