ggKbase home page

RTP_01242018_0_2um_scaffold_2496_6

Organism: RTP_01242018_0_2um_Betaproteobacteria_47_58

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(3735..4073)

Top 3 Functional Annotations

Value Algorithm Source
VGR-related protein n=1 Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8IZD5_HERSS similarity UNIREF
DB: UNIREF100
  • Identity: 53.6
  • Coverage: 112.0
  • Bit_score: 130
  • Evalue 7.00e-28
VGR-related protein similarity KEGG
DB: KEGG
  • Identity: 53.6
  • Coverage: 112.0
  • Bit_score: 130
  • Evalue 2.00e-28
VGR-related protein {ECO:0000313|EMBL:ADJ62255.1}; TaxID=757424 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum seropedicae (strain SmR1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.6
  • Coverage: 112.0
  • Bit_score: 130
  • Evalue 9.80e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Herbaspirillum seropedicae → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 339
CTGCAGGCCGGGCAGTCTGCCATTGTGCTGGAGGGCGGCAATATTACCTTTACCTGTCCGGGGGTGTTTTCGGTTAAGGGGGCTAGTCATCCGTTTAGTGGGGGGGCGAGTGATGCCGCGAGTTTGGGGGCTTTGCCGAATACCACATTCAAGCTGTATGACGAAGCATTTGCCGTGCTTGACCCAGACGGTAATCCGCTCGATACCCTGCCATACAGCATTGAAGGTGCCAATGGCAAGCATGGTGCAGACACCGAGACTGAGGGCAATACTCATCGCACCGGAACGGATGCAAGCGAGTCATTAACATTCTCATTGCAATGGCACGAAGTGTTATAA
PROTEIN sequence
Length: 113
LQAGQSAIVLEGGNITFTCPGVFSVKGASHPFSGGASDAASLGALPNTTFKLYDEAFAVLDPDGNPLDTLPYSIEGANGKHGADTETEGNTHRTGTDASESLTFSLQWHEVL*