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RTP_01242018_0_2um_scaffold_2815_3

Organism: RTP_01242018_0_2um_Betaproteobacteria_47_58

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: 1374..2114

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002F4CF46 similarity UNIREF
DB: UNIREF100
  • Identity: 74.0
  • Coverage: 246.0
  • Bit_score: 366
  • Evalue 1.70e-98
Flagellar basal body rod protein FlgF {ECO:0000313|EMBL:KIF82160.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.9
  • Coverage: 246.0
  • Bit_score: 357
  • Evalue 1.40e-95
flgF; flagellar basal-body rod protein flgf similarity KEGG
DB: KEGG
  • Identity: 69.1
  • Coverage: 246.0
  • Bit_score: 349
  • Evalue 7.80e-94

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Taxonomy

Herbaspirillum sp. TSA66 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 741
ATGGATAGGCTAATCTACACGGCGATGACGGGTGCGAAGCATGTTATCGAACAACAGGCTAACACCTCACACAACCTTGCCAATGCCATGACCACTGGCTTTCGTGCGCAGTTAGATAGTTTTCGTGCTGTACCCGTGTTAGGGGGTAGCTTACCCACCCGTGCTTTTGTAGTGGATTCGACAGTAGGTACGGACTTTACGCCAGGACCTATACAGCAAACAGGGCGTGACTTAGATGTGGCCATGCAGGGAAAAGGCTGGCTCGCAGTGGACGTGGGTAATGGCACTGAAGCTTATACCCGCAATGGCAGCTTGAAAATAAATGAAAATGGCCTGTTGCAAACGCAAGCTGGCTTGAACGTATTAGGTGAATCCGGTCCGATTACCATCCCGCCTGATGAGAATGTGGCGATTGCTAAAGATGGTACCGTGTCTAGTATTCCTAGAGCGGGTGCTGCAACTTCAGTGAATATTATCGGCCGGATTAAATTAGTCAATCCACCCGAAGTGAATCTAGTGCGAGGTGATGATGGTCTGTTTCGCACCAAGGATGGTAAGCCAGCCGATGCAGATGCTATCGTTACTGTTGTCAACGGAGCTGTTGAAGGCAGTAATGTCAACGTGGTATCCGCCATGGTGGATATGATTAGTTTAGCGCGACAGTTCGAAATGCAGATGAAACTACTCACTAATGCAGAGAACAACGCCAATAAAGCAGGTCAAATCCTGAATTTGTCTTAA
PROTEIN sequence
Length: 247
MDRLIYTAMTGAKHVIEQQANTSHNLANAMTTGFRAQLDSFRAVPVLGGSLPTRAFVVDSTVGTDFTPGPIQQTGRDLDVAMQGKGWLAVDVGNGTEAYTRNGSLKINENGLLQTQAGLNVLGESGPITIPPDENVAIAKDGTVSSIPRAGAATSVNIIGRIKLVNPPEVNLVRGDDGLFRTKDGKPADADAIVTVVNGAVEGSNVNVVSAMVDMISLARQFEMQMKLLTNAENNANKAGQILNLS*