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RTP_01242018_0_2um_scaffold_2130_2

Organism: RTP_01242018_0_2um_Betaproteobacteria_47_58

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: comp(434..2209)

Top 3 Functional Annotations

Value Algorithm Source
Lipid A export ATP-binding/permease protein MsbA {ECO:0000313|EMBL:CBI10189.1}; EC=3.6.3.- {ECO:0000313|EMBL:CBI10189.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.3
  • Coverage: 574.0
  • Bit_score: 843
  • Evalue 1.60e-241
Lipid A export ATP-binding/permease protein MsbA n=1 Tax=mine drainage metagenome RepID=E6QSG7_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 76.3
  • Coverage: 574.0
  • Bit_score: 843
  • Evalue 1.10e-241
lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA similarity KEGG
DB: KEGG
  • Identity: 61.2
  • Coverage: 575.0
  • Bit_score: 713
  • Evalue 2.90e-203

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Taxonomy

mine drainage metagenome

Sequences

DNA sequence
Length: 1776
ATGGGGCTTGAGCGCCCAGGTGTTTGGCGCGTGACTGATACCAAGCACGAAAGCCTGAAACTCTATCTTCGTCTGCTGCAATACGTGCGCCCCTATTGGCGCATGTTTGGTGGCGCATTATTGGCAATGGCAGTACTGGCAGCAGCTGAACCTGCTATACCCGCGCTGTTCAAGCCGCTACTGGATGGCAGTTTTGTCAAAAAAGATCCCGATCTAATACTACTTATTCCGTTGCTCATGGTGGGGGTATTTTTTATACGCGGTCTTGCTGATTTTGCCAGCACTTACGCCATGAACTGGGTGGGCAGTCAATTAGTCATGGACTTACGCACTGCTATGTTTAACAAACTCATGGCCATGCCTACGCGTTATTATGACAACAGCTCAACAGGCACGCTCATCGCGCATGTCGTGTTTAACGTCACCCAGGTTACCCAATCTGCCACCAGCGCGGTTACCTTGTTAGTGCGCGACACACTGACCATTATCGGGCTACTCAGCTGGTTGCTCTGGTTGAACTGGAAACTCACGCTTATCATTATTGCCATCGCGCCCATTGCCGTCTTGATTATTCGCAAAGTCAGTCGCAGGTTGCGCAATATCAATCGCCAGGCGCAACAAAATCTCGGAGAAATAACCCATGTGGTCGAAGAGTCAGTAGGCGCGCATAAAGTCGTCAAGATTTTTGGCGGGCAAGATTATGAATCCCGCCGCTTCACCAGTGCAGTCAACAACGCCCGCCGTTACACTATGAAAGGGGTGACGGCTGCCGCCGCGAATGGTCCTGTGGTGCAATTAGTCGCCGCATTAGGCGTTGCACTAGTGGTATACATCGCCACCAAACAAGCACTCGCCGGTGAAATCACCGTCGGTGGTTTTGTCTCTTACATCATCGCCATGCTCATGATATTTGGTCCGGTGAAACGGCTCACCGGCATAAATGAACAGCTGCAACGTGGTCTGGCGGCGGCTGAAGTAGTGTTTGATGTCATCGATAGCGTAGCAGAAATAGACACCGGCACTGTCCCGCTAGACCGTGCGCGTGGCGCGTTAAGCTTTAACCATGTGAGCCTGTATTACCCAGATAAACCGACACCCGCGCTAGACAATATCAACCTCGACATCCAGCCAGGTGAAACCATCGCCCTCGTCGGTGCATCTGGTAGTGGAAAAACCAGCTTGATCAATCTCATTCCGCGTTTTTACAGCATAGACCAAGGGGAAATTTTACTCGATGGACATGATATCACCGCGCTCACCCTCAGCAGCCTACGCGCTAACATTGCCATGGTATCGCAAGATGTGTCGCTATTTAACGACACCATCGCTGCCAATATCGCTTACGGCGCACAAGCCAGTGCCACCGAAGCCGACATCATTCACGCTGCCGAAGCCGCTCATGCTATGGAATTCATCCGCCAGCAGCCGCTAGGTTTACTGACCATGGTAGGTGAAAATGGCGTGAAGCTCTCAGGTGGACAACGGCAACGTATCGCCATCGCCCGCGCGCTACTGAAAAATGCACCCGTACTCATCCTCGATGAAGCCACTTCTGCGCTCGACACTGCATCCGAACGTCACGTCCAGGCCGCTCTGGAAACCCTGATGCAAGGCCGCACCACCTTGGTTATCGCGCATCGTTTATCCACCATAGAGAATGCTGACCGCATCGCCGTCATGCAACAAGGACGTATAGTCGAAATTGGCAAACACGCCGAACTGATTAAACAAAACGGCGTTTACGCACACTTGCACAGGTTGCAATTCCATGAATAA
PROTEIN sequence
Length: 592
MGLERPGVWRVTDTKHESLKLYLRLLQYVRPYWRMFGGALLAMAVLAAAEPAIPALFKPLLDGSFVKKDPDLILLIPLLMVGVFFIRGLADFASTYAMNWVGSQLVMDLRTAMFNKLMAMPTRYYDNSSTGTLIAHVVFNVTQVTQSATSAVTLLVRDTLTIIGLLSWLLWLNWKLTLIIIAIAPIAVLIIRKVSRRLRNINRQAQQNLGEITHVVEESVGAHKVVKIFGGQDYESRRFTSAVNNARRYTMKGVTAAAANGPVVQLVAALGVALVVYIATKQALAGEITVGGFVSYIIAMLMIFGPVKRLTGINEQLQRGLAAAEVVFDVIDSVAEIDTGTVPLDRARGALSFNHVSLYYPDKPTPALDNINLDIQPGETIALVGASGSGKTSLINLIPRFYSIDQGEILLDGHDITALTLSSLRANIAMVSQDVSLFNDTIAANIAYGAQASATEADIIHAAEAAHAMEFIRQQPLGLLTMVGENGVKLSGGQRQRIAIARALLKNAPVLILDEATSALDTASERHVQAALETLMQGRTTLVIAHRLSTIENADRIAVMQQGRIVEIGKHAELIKQNGVYAHLHRLQFHE*