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RTP_01242018_0_2um_scaffold_12036_1

Organism: RTP_01242018_0_2um_Betaproteobacteria_47_58

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 2
Location: 2..730

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-32 factor n=1 Tax=mine drainage metagenome RepID=E6QSM8_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 73.3
  • Coverage: 240.0
  • Bit_score: 356
  • Evalue 1.70e-95
RNA polymerase sigma-32 factor {ECO:0000313|EMBL:CBI10250.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.3
  • Coverage: 240.0
  • Bit_score: 356
  • Evalue 2.40e-95
rpoH; RNA polymerase, sigma 32 (sigma H) factor similarity KEGG
DB: KEGG
  • Identity: 67.6
  • Coverage: 241.0
  • Bit_score: 328
  • Evalue 8.20e-88

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Taxonomy

mine drainage metagenome

Sequences

DNA sequence
Length: 729
TTGCGTGATCACGGTGACGTAGATGCCGCAAAACGCTTAGTCTTATCGCACTTACGCGTAGTCGTCAGCATGGCACGTAAGTTTGTCGGTTATGGCTTGCCACAGGCCGATTTAATCCAAGAAGGTAATATCGGACTGATGAAAGCAGTAAAGCGCTTTGATCCAGATCGGGGTGTGCGTTTGGTATCATTTGCTATGCACTGGATTAGCGCGGAGATGCATGAGTACATCGTACGTAACTGGCGCATGGTAAAAATAGCCACGACTAAAGGACAACGCAAGCTGTTCTTTAATTTACGCAGCATGAAAACCAGCGGTAATAGCCTGACTAGCAGCGAAGTTAATGACATTGCTGAGAAGCTAGGGGTAAAGCGCGAAGAAGTGCTGGAAATGGAAACGCGCTTTAGCGGTCAAGATATGACACTAGAGCCCTTCAACGACGACGGTGAAGAAAGTTATAGTCCACTGGCTTATTTAACAGATAGCGAAGATGAGCCGTCCAAGATACTAGCGCGCACTGAACACGAGCACCTCAGCAGCACGGGTTTAAGTAATGCGTTGGCAGCATTAGACCCACGCAGCCGCCACATTGTTGAATCGCGTTGGTTACGCGAAGACAATCCTGCGACTTTGCATGAATTAGCAGCCGAATATAGCATCTCTGCCGAGCGCGTACGCCAAATTGAGCAAAAAGCCATGCAAAAAATGAAACTCGCATTACACCGGTGA
PROTEIN sequence
Length: 243
LRDHGDVDAAKRLVLSHLRVVVSMARKFVGYGLPQADLIQEGNIGLMKAVKRFDPDRGVRLVSFAMHWISAEMHEYIVRNWRMVKIATTKGQRKLFFNLRSMKTSGNSLTSSEVNDIAEKLGVKREEVLEMETRFSGQDMTLEPFNDDGEESYSPLAYLTDSEDEPSKILARTEHEHLSSTGLSNALAALDPRSRHIVESRWLREDNPATLHELAAEYSISAERVRQIEQKAMQKMKLALHR*