ggKbase home page

RTP_01242018_0_2um_scaffold_6305_2

Organism: RTP_01242018_0_2um_Hydrogenophilales_61_5

megabin RP 51 / 55 MC: 21 BSCG 48 / 51 MC: 17 ASCG 12 / 38 MC: 4
Location: comp(627..962)

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Lamprocystis purpurea RepID=UPI0003708479 similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 111.0
  • Bit_score: 191
  • Evalue 3.30e-46
helix-turn-helix family protein similarity KEGG
DB: KEGG
  • Identity: 81.1
  • Coverage: 111.0
  • Bit_score: 184
  • Evalue 1.10e-44
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 96.4
  • Coverage: 111.0
  • Bit_score: 211
  • Evalue 4.30e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 336
ATGGCAAAACGAATCATTGATGGCATTGAGGTCGAAATGGGATCGGGGAATGTATTTGCCGATCTTGGTCTGCCCGACGCCGAAAAACTCAAAATCAAATCCGGTTTGGTGATTGAGATCACCAAAGCCGTGCGCAAACTCGGGCTCACCCAAGATGAGGCGGCTCGTCGCATGGGCATCACACAGCCGAAGGTGTCCGGAATGCTGCGCGGCGACTTTTCCAACCTGTCCGAACGCAAGTTGATGGACTGCTTGAATCGGTTGGGCTATGACATCGAAATCAAGGTGAAGCCTGCCGCCGAACCTCTTGGACATTTAGTGATTGCTGTCGCTTGA
PROTEIN sequence
Length: 112
MAKRIIDGIEVEMGSGNVFADLGLPDAEKLKIKSGLVIEITKAVRKLGLTQDEAARRMGITQPKVSGMLRGDFSNLSERKLMDCLNRLGYDIEIKVKPAAEPLGHLVIAVA*