ggKbase home page

RTP_01242018_0_2um_scaffold_9438_3

Organism: RTP_01242018_0_2um_Hydrogenophilales_61_5

megabin RP 51 / 55 MC: 21 BSCG 48 / 51 MC: 17 ASCG 12 / 38 MC: 4
Location: comp(893..1297)

Top 3 Functional Annotations

Value Algorithm Source
biopolymer ExbD/TolR family transporter; K03559 biopolymer transport protein ExbD id=12498165 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 81.1
  • Coverage: 132.0
  • Bit_score: 218
  • Evalue 2.30e-54
biopolymer ExbD/TolR family transporter similarity KEGG
DB: KEGG
  • Identity: 80.3
  • Coverage: 132.0
  • Bit_score: 216
  • Evalue 2.50e-54
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.4
  • Coverage: 134.0
  • Bit_score: 216
  • Evalue 1.20e-53

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_Hydrogenophilales_62_11_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 405
ATGCACGTTCAGGAAGACAACGAACCCTACGACCAGATCAACGTGGTGCCGATGCTGGACCTGGCCTACGTGCTGCTGGTGATTTTCATCATCATGACCACTGCCTCGGTGCAGGGTGTCAAGGTCAATCTACCGCAGGCGTCCGATACGCCCAGCCTCGCGAAACCCAAGACCAAGGCGATTACCGTCACGCAGGACGGGCAGGTTTATCTCGACACCTATCCCGTGTCGATGGAGGAGCTGCGCACCCAACTTGCGTCGGCCAGGGCGGCCGATCCGGAACTGCCGGTCGTCATCAAGGGCGACACAGTGGTGCAGTACGGCAAGGTGATGGAAGTGCTCGACCTGCTGGGGCAGGTGGGTATCACGCAGATGGGGCTGGTGACTCAGCCGCCCGCGAAGTAG
PROTEIN sequence
Length: 135
MHVQEDNEPYDQINVVPMLDLAYVLLVIFIIMTTASVQGVKVNLPQASDTPSLAKPKTKAITVTQDGQVYLDTYPVSMEELRTQLASARAADPELPVVIKGDTVVQYGKVMEVLDLLGQVGITQMGLVTQPPAK*