ggKbase home page

RTP_01242018_0_2um_scaffold_8174_1

Organism: RTP_01242018_0_2um_Hydrogenophilales_61_5

megabin RP 51 / 55 MC: 21 BSCG 48 / 51 MC: 17 ASCG 12 / 38 MC: 4
Location: comp(2..436)

Top 3 Functional Annotations

Value Algorithm Source
sigma E regulatory protein, MucB/RseB; K03598 sigma-E factor negative regulatory protein RseB id=12493446 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 74.5
  • Coverage: 145.0
  • Bit_score: 232
  • Evalue 1.70e-58
sigma E regulatory protein, MucB/RseB similarity KEGG
DB: KEGG
  • Identity: 65.5
  • Coverage: 145.0
  • Bit_score: 189
  • Evalue 4.60e-46
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.0
  • Coverage: 146.0
  • Bit_score: 223
  • Evalue 1.40e-55

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 435
ATGCGGACAGTGACAGTTTGGCAGCGGGAGTGGTTGGCGATCGCGTTTGTAGGCTTGGTGACATTGCCTGGTGTGGCTCAGGCCGATACCGCGCTTGAATGGCTGAATCGGGCGGCCGTTGCCGCCAAGCAACAGAATTTCAGCGGCGTCTATGTGTATCACCACGGCGAGCACGTTGAAGTGCAACGAGTTTTGCATCGCGTCGACGCCACCGGCGAGCAGGAAAAAGTCGAGGTTATGGATGGCTCGCCGCGCCAGTTCCTGCGGGTCAATAGCGATGTGTTCTGCTATCTGCCGGACGGCAAGCATGTGCTGCTTGAGCGCAATACCTCGCGCCGTTTTTTCCCCGCCATATTGCCGGCGCAACCGGCGGCCCTGCTCGGCTACTACGAGGCGAAACTCGGCGGCTCAGAGCGCGTGGCGGGCCGCACTTGC
PROTEIN sequence
Length: 145
MRTVTVWQREWLAIAFVGLVTLPGVAQADTALEWLNRAAVAAKQQNFSGVYVYHHGEHVEVQRVLHRVDATGEQEKVEVMDGSPRQFLRVNSDVFCYLPDGKHVLLERNTSRRFFPAILPAQPAALLGYYEAKLGGSERVAGRTC