ggKbase home page

RTP_02272018_0_2um_scaffold_6106_1

Organism: RTP_02272018_0_2um_Betaproteobacteria_47_68

near complete RP 52 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 3
Location: 2..2566

Top 3 Functional Annotations

Value Algorithm Source
translation initiation factor IF-2 n=1 Tax=Thiobacillus denitrificans RepID=UPI00037C6BD1 similarity UNIREF
DB: UNIREF100
  • Identity: 65.4
  • Coverage: 874.0
  • Bit_score: 1041
  • Evalue 0.0
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.0
  • Coverage: 857.0
  • Bit_score: 1042
  • Evalue 0.0
infB; translation initiation factor IF-2 similarity KEGG
DB: KEGG
  • Identity: 66.5
  • Coverage: 865.0
  • Bit_score: 1039
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sulfuricella sp. T08 → Sulfuricella → Sulfuricellales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2565
GGTAAAGCGCGCACCATCCAAGTGGAAGTGCGTAAAAAACGCGTATTAGTCAAGCGTGAGCCCGTCCCGTCCAATCCATCTGAAGTAGATGCAGTAATAGAAAATGTAGTCGATGTTGAATCTGTGTTGCCAACGACAGAAATTGAACCTGTTGTTGAGCCGGTGGTTATTGAGCCTGAGATCGTAGTAGCACCGATAGTTCACGTCGAACCAGTTGCCGTGGTCGTGCCAGAGGTAGAAATAGAGCCTGTACCCGCGGTAGCATTGGAAGTCGTAATTGAAGACAGCGTAGTGAGTCCTGAAGTAGAGGCAGTCGCTAATGTTGAGCCTGTGTTGCAGCGCAAACGAATTGTCAAGCCCGTTCTCGACGATCTGGAATTAGCACGTCGTGCAGATGAAGAGCGTCGTAAATCAGCCTTGCATGCTCATCAAGCCGAAGAGATACGAGTTAAGCAAGAGCGCGAAGTTAAACGCAAACAAGCAATAGAAACCCAGCTAGCTGCTGCAGAAGCTGCCAAAAATCCAGCGCCTGTTGTAGTCGCCGTTGCCGCTGCAAAACCGGTAGCTAAGGAAGGCACGTTACATAAAAATGTTGCCAAACCGGACGATAAGTCTAAAGTAGCTGATAAAAAAGCCAAGGCGCCTGCGACTAAAGCTGATACAGCCTGGAATGACATGCAAGCGAAAAAGCGCGGTATTAAATCGCGTGGTGATACGGGTGGTGATGCTTGGCGTAACCGTAAAGGGGGTGGTAGACACCATAAAGCGGGTAATGATGCAGCAACCAACTTTAGCGCACCGAGCGAGCCTATCGTGCAAGAAGTGTTGATACCAGAAACCATTACCGTTGCAGAGTTATCGCACAAAATGTCGGTAAAAGCTGCGGAAGTAATTAAAGCCCTGATGAAAATGGGTAGCATGGTGACGATTAACCAAGTGCTGGATCAAGAAACGGCCATGATCGTTGTCGAAGAAATGGGACACGTTGCTAAACCTGCTCCGCTTGATACACCAGAGTCTTTCCTGGAAGAATCAGAACAGCACGAAGTAGAAATGACACATCGCGCCCCTGTGGTAACAGTGATGGGTCACGTTGATCATGGTAAAACTTCATTGCTCGATGCTATCCGCCGAGCGCGTGTCGCTAGTGGTGAAGCGGGCGGGATTACGCAACATATAGGTGCGTATCATGTTGAAACAGACCATGGTATGGTTACTTTCTTGGATACCCCTGGTCACGAAGCCTTTACTGCCATGCGCGCACGCGGTGCGCAAGTGACGGACTTAGTTGTGTTAGTGGTCGCTGCTGATGATGGTGTGATGCCACAGACTATAGAAGCGATACATCACGCGAAGGCAGCAAATGTGCCTATCGTTGTGGCAGTGAATAAAATGGATAAACCTGAAGCGAATGGCGAACGTATTCGTCAAGAGCTAGTGGCACAAGGCGTAGTGCCTGACGATTGGGGTGGTGATACCCAGTTCGTTGAAGTGTCAGCGAAAAAAGGCACGAACATCAATGGCTTAATTGAGGCTATTTTGCTGCAGGCTGAAGTGTTGGAGTTAACCGCAGCGAAAGATGCACCCGCCAGAGGTGTGATTATTGAAGCGCGTTTGGATAAAGGGCGTGGTCCTGTAGCGACACTGTTGGTGCAGTCAGGTACGTTAAGACGTGGTGATGTCGTGCTTGCAGGTGCGGTTTACGGTCGTGTTCGCGCCATGTTGGATGAAGATGGTAAGACTATTTTAGAAGCAGGGCCGTCTATTCCTGTTGAAATTCAAGGTCTGTCTGATGTCCCTAAAGCGGGTGAGGATGCCATGGTGCTGCAAGATGAACGTAAAGCACGTGAAATCGCGTTGTTCCGTCAAGGCAAATTCCGTGATGTACATTTGGCTAAGCGTCAAGCGGCTAAATTGGAAAGTATCATGGAGCAAATGGGCGAAGGCGAAGCCAAACGCCTGCCCTTGATACTCAAAGCAGACGTACAGGGTTCGGCTGAAGCATTATCAGTGTCATTGCAAAAAATCTCGACTGATGAAGTTAAAGTGGATATTTTGCATAATGCGGTAGGTTCAATTTCAGAGTCAGATGTCAATTTGGCAGCGGCTTCTAAAGCCGTTATCATCGGCTTTAACGTTCGTGCAGATGCAACAGCACGTAAGCTGGCAGAAACATTGGGTGTGGATATACGTTATTACAGCATCATTTACGAAGTCGTTGACCTTGTTAAAGGCGCGTTGTCTGGCATGTTGAGTCCTGATTTGAAAGAAAATATCACGGGCATGGTAGAGGTGCGTGAAGTGTATGTGATTTCTAAAATTGGCACGGTGTTAGGTTGCCATGTGTTGGATGGCGTTATCAAACGCGGTCAACGTGTGCGTATCTTGCGGGTCGGCGCTGTGATTCATGATGGTGAATTAGATTCATTAAAACGCTTCAAAGATGATGTGAAAGAAGTTAAATTTGGTTATGACTGTGGTTTGTCAGTTAAAGGCTTTAACGACATGCAAATCGGCGACAAATTAGAAGCTTACGAAGTTGTCGAAGTCGCACGCACACTGTAA
PROTEIN sequence
Length: 855
GKARTIQVEVRKKRVLVKREPVPSNPSEVDAVIENVVDVESVLPTTEIEPVVEPVVIEPEIVVAPIVHVEPVAVVVPEVEIEPVPAVALEVVIEDSVVSPEVEAVANVEPVLQRKRIVKPVLDDLELARRADEERRKSALHAHQAEEIRVKQEREVKRKQAIETQLAAAEAAKNPAPVVVAVAAAKPVAKEGTLHKNVAKPDDKSKVADKKAKAPATKADTAWNDMQAKKRGIKSRGDTGGDAWRNRKGGGRHHKAGNDAATNFSAPSEPIVQEVLIPETITVAELSHKMSVKAAEVIKALMKMGSMVTINQVLDQETAMIVVEEMGHVAKPAPLDTPESFLEESEQHEVEMTHRAPVVTVMGHVDHGKTSLLDAIRRARVASGEAGGITQHIGAYHVETDHGMVTFLDTPGHEAFTAMRARGAQVTDLVVLVVAADDGVMPQTIEAIHHAKAANVPIVVAVNKMDKPEANGERIRQELVAQGVVPDDWGGDTQFVEVSAKKGTNINGLIEAILLQAEVLELTAAKDAPARGVIIEARLDKGRGPVATLLVQSGTLRRGDVVLAGAVYGRVRAMLDEDGKTILEAGPSIPVEIQGLSDVPKAGEDAMVLQDERKAREIALFRQGKFRDVHLAKRQAAKLESIMEQMGEGEAKRLPLILKADVQGSAEALSVSLQKISTDEVKVDILHNAVGSISESDVNLAAASKAVIIGFNVRADATARKLAETLGVDIRYYSIIYEVVDLVKGALSGMLSPDLKENITGMVEVREVYVISKIGTVLGCHVLDGVIKRGQRVRILRVGAVIHDGELDSLKRFKDDVKEVKFGYDCGLSVKGFNDMQIGDKLEAYEVVEVARTL*