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RTP_02272018_0_2um_scaffold_11727_3

Organism: RTP_02272018_0_2um_Betaproteobacteria_47_68

near complete RP 52 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 3
Location: 1123..1452

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.2
  • Coverage: 110.0
  • Bit_score: 182
  • Evalue 2.80e-43
Ribonuclease VapC n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VNA5_POLNA similarity UNIREF
DB: UNIREF100
  • Identity: 78.2
  • Coverage: 110.0
  • Bit_score: 182
  • Evalue 2.00e-43
PilT domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 78.2
  • Coverage: 110.0
  • Bit_score: 182
  • Evalue 5.60e-44

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Taxonomy

Polaromonas naphthalenivorans → Polaromonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 330
TTGAAGTACCTCCTCGATACCTGTGTGCTATCAGAGTTAGTAAAGACAACACCTGACTCCGCCGTACTCGCGTGGATGAGTGAGCGTAAAGAACATGAGCTCTACGTTAGTGCAATGACGATAGCCGAGCTTCATCGGGGTATTGCAAAACTCACCCCCTCCCGTCGCAGGAACGACTTAACTGTTTGGATACAGCAATTGGAAGCAGGATTTGATGAGCGTGTGCTGCCATTTACATGCGACACAGCCCATACTTGGGCAGAAATGTGCGCGAAAGCAGAGTCCATTGGCAAGCCGATTGCCGCTTTTGATTCAATCATTGCTGCAACC
PROTEIN sequence
Length: 110
LKYLLDTCVLSELVKTTPDSAVLAWMSERKEHELYVSAMTIAELHRGIAKLTPSRRRNDLTVWIQQLEAGFDERVLPFTCDTAHTWAEMCAKAESIGKPIAAFDSIIAAT