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RTP_02272018_0_2um_scaffold_12227_1

Organism: RTP_02272018_0_2um_Betaproteobacteria_47_68

near complete RP 52 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 3
Location: 3..827

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA large subunit methyltransferase F {ECO:0000256|HAMAP-Rule:MF_01848, ECO:0000256|SAAS:SAAS00036602}; EC=2.1.1.181 {ECO:0000256|HAMAP-Rule:MF_01848, ECO:0000256|SAAS:SAAS00036596};; 23S rRNA mA1618 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01848}; rRNA adenine N-6-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01848}; TaxID=1395571 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas taeanensis MS-3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.2
  • Coverage: 277.0
  • Bit_score: 345
  • Evalue 6.20e-92
16S rRNA methyltransferase n=1 Tax=Pseudomonas sp. S9 RepID=UPI00025568D6 similarity UNIREF
DB: UNIREF100
  • Identity: 57.0
  • Coverage: 277.0
  • Bit_score: 328
  • Evalue 5.60e-87
rlmF; Ribosomal RNA large subunit methyltransferase F similarity KEGG
DB: KEGG
  • Identity: 56.6
  • Coverage: 279.0
  • Bit_score: 320
  • Evalue 3.30e-85

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Taxonomy

Pseudomonas taeanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 825
CACGGTATCACCACTATTGATTTTGCCAATCCAGTTGCTGTAAAAACGCTCAATCGCGCGTTACTCAAAACGCATTATGGTATTACCTCGTGGGATATTCCACCCGATTACTTATGCCCAGCCGTACCCGGTCGCGCTGATTACCTGCATTATCTGGCCGATCTTTTAACAAGCAGCAACGCAGGGAAAATCCCAAAACATGTACAGGCACTTGACATAGGCACAGGCGCAAACTGCATTTATCCATTAATTGGTCAAAGCGAATACAACTGGCAATTCGTCGCTACCGATAGCAACCCCATCGCATTAAATAATGCACAAATCATACTGAACCATAATCCCAAGGCAGCACTACATATCACACTACGCTTACAAGCCGACTCCAATGCAATTTTTAGCAATATCATCCATGATGATGAATGGTTTGACGTCACCCTCTGCAACCCACCTTTCCATGCATCTAAAGCTGAGGCTAGTGCAGGCACGCAACGAAAATGGCGCAATTTAGGTAAACAGCTTAATCAAAGCAAGTCCACTTTGAATTTTGGTGGGCAAGATGGCGAGCTCTACTGCACGGGGGGTGAACTCACTTTCATACTCCGCATAATAGCGGAAAGCGCTAAGCTCTCCACGCGCTGTTTTTGGTTTACCACGCTGGTATCAAAATCAGCTAACTTGCCAAATATCTATGCTGCACTCAAACAGGCAGGTGTAGTTCAGCTACTAACTGTCAGCATGCAGCAAGGACAAAAGCAAAGCCGTTTTCTGGCTTGGACTTTCCTAACGCCAACCCAGAAAACTGCTTGGCGCAACCTACGATGGTAA
PROTEIN sequence
Length: 275
HGITTIDFANPVAVKTLNRALLKTHYGITSWDIPPDYLCPAVPGRADYLHYLADLLTSSNAGKIPKHVQALDIGTGANCIYPLIGQSEYNWQFVATDSNPIALNNAQIILNHNPKAALHITLRLQADSNAIFSNIIHDDEWFDVTLCNPPFHASKAEASAGTQRKWRNLGKQLNQSKSTLNFGGQDGELYCTGGELTFILRIIAESAKLSTRCFWFTTLVSKSANLPNIYAALKQAGVVQLLTVSMQQGQKQSRFLAWTFLTPTQKTAWRNLRW*