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SR-VP_26_10_2019_2_100cm_scaffold_4960_9

Organism: SR-VP_26_10_2019_2_100cm_Methanoperedens_44_46

near complete RP 28 / 55 MC: 5 BSCG 21 / 51 MC: 1 ASCG 32 / 38
Location: 5934..10766

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA polymerase II large subunit {ECO:0000256|HAMAP-Rule:MF_00324}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00324};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00324};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.2
  • Coverage: 1610.0
  • Bit_score: 2779
  • Evalue 0.0
XRE family transcriptional regulator (EC:2.7.7.7) similarity KEGG
DB: KEGG
  • Identity: 46.9
  • Coverage: 1642.0
  • Bit_score: 1423
  • Evalue 0.0
DNA polymerase II large subunit n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KSZ3_ARCVS similarity UNIREF
DB: UNIREF100
  • Identity: 46.9
  • Coverage: 1642.0
  • Bit_score: 1423
  • Evalue 0.0

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 4833
ATGAAATTCGCCGCCAGCGATGCGATGCTTTCTTATTTTAATGGCCTCGAATCCGAGCTTAACCGCGCCATCGACCTCGCAAACCGCGCACGCGCAAACGGCGCCGACCCGACCCCCTCGACAGAAATTCCAATCGCAAAAGACCTTGCCGACAGGGTTGAAAAGCTCATCGGCGTTGAGGGTGTTGCAAAGCGGTTAAGAGAGCTTGAATCTACCATGTCACGCGAAGAGGCTTCGCTGCAGCTCGGTCTTGAGGTAGCGAGCGGCAAAATCAAACAGTTTGAATCACAAAAGGATGCCATCGAGGCTGCCGTAAGGGTTGCGATGGCTGTTCTCACCGAAGGGGTCGTGGCAGCGCCAATAGAGGGCATCGCAAAAATAGACCTTGCAAAGAACGACGACGGCTCTGATTATATCAGGATTTATTATGCCGGCCCGATCAGGAGCGCTGGCGGCACTGCGCAGGCGCTATCGGTGCTGGCTGCTGACTATATCCGCGGAAGCCTTGGGATTAACCGTTTTATCCCGCGGGCTGAAGAAGTGGAGAGGTATGTGGAAGAAATCGCTGCATATCACAGGGCAGTCCACCTCCAGTATATGCCCACTGATGAAGAAATCAGGCTGATTGTGCGGAACTGCCCGATATGTATAGACGGCGAGCCCACGGAAGAGGCTGAGGTGGAAGGGCGGCGTGACCTTGCCCGCATCGAAACGAACAGGATACGCGGCGGCATGGCGCTTGTCATTGCCGAGGGTATCGCGCTCAAAGCCCCGAAAGTGAAAAAACATGTGGATAAATTGAAACTCCCGGGATGGGACTTTCTTGAGAAATTCGTGGTAACGGTGAAAACGGATGATGCCTCGGCACAGTTAAAACCAAAAGACAAATATCTGCAGGATTTGATTGCGGGGAGACCGGTTTTTTCATATCCTTCAAGACCAGGGGGATTCAGGCTCAGGTACGGCAGGGGAAGGAACACGAGTTTTGCAGCCGCGGGTATCAGCCCAGCAACGATGGTAATGATGGACGACTTTATAGCTGCTGGAACGCAGATTAAAGTGGAGCGCCCGGGTAAAGCAGCAGGCATCGCGCCTGTGGATACGATAGAAGGTCCTACAGTACGTTTATTCAACGGGGATGTTTTAAGAGTGGACACGCAGGCTGAAGCTCTCAAAATAAGACCATCTGTGCAGAGGATTCTCGATATCGGAGAGATTCTAATAAACTTCGGGGACTTTCTTGAGAATAACCATCCTCTTGTGCCTTCATCATACTGTTATGAATGGTGGCTCCAGGAACTTGCCGCAAAGATACCTCTAAATGAACAGGGAGATTTGAGAAACCCGGACCAGAAAACAGCACTGTCTTTATCGGACACCTATAAAGTGCCGCTTCACCCTAAATACACGTATCTCTGGCACGATATTTCACTCGATGAGTATACGGCTTTAGCTGAATACATCCAGAAAAACGGGAAATTTGCTGAAAAAGTTGAATTTCCTCTAGATGACACAATAAAAACCATTCTTGAGACATTGCTTGTACCTCATATCGTGCGTGAGAAGCTTATTTTTATCGAAGAGCCGCTCCCGTTGATGAGATGCCTCGGGCTTGACGCAAATCTGAAAAAGACATGGGCTTCTGCAGAATCTAATATCATGGATACTGTTTCAAAGGTGAGCGGAATAACTATCCGAAGCCGCGCGCCCATCAGAATCGGGGGGAGGATGGGAAGACCTGAGAAATCCGACAAAAGGGAAATGAAACCTGCGCCGCATGTGCTTTTTCCTATCGGTGAAGCGGGAGGACGGCGAAGATCGCTTAAGAGCGCGAGGGATTATATCGATGATACCGATAACGGCGGGAAAAATAATAATGAGTTTAAGACAGGACTTTCTGTCCAGACAGAAAAGGCTGGAACGATAAAAGTCCAGATTGGGGAGCGCATCTGCCCTTCATGCAAGACCAGGACGTTCAAGAACAGGTGCACATGCGGTAAATCTACGCATCCGCTTCTTAAATGCCAGTCCTGCGGGATTGAAGTCCCAAAACCCGTGTGCCCGAAGTGCAAAAAAGAGACCACATCTGTCACGGAACTGGAGATTGATTTCAAGTCAGAGTACCAGCAGGCGCTGGATAATGTGGGTGAGAGGGACAACTTTGACTCGATAAAAGGCGTTATCGGCCTTACCTCAAAAAATAAAACGCCTGAGCCTCTTGAAAAAGGAATCCTTCGCGCGAAACATGATATTGTGATGTTCAAGGACGGGACTGTCAGGTATGACCTTTCCGACCTGCCTCTCACGCATATAAAGCCCAGGGAATTAGGGATTTCAGTTCAGAAGCTGAAAGAACTCGGGTATGTGAACGACACGTACGGAAAGCCTCTCGTTGATGAAAACCAGGTCATTGAACTTAAAGTACAGGACATCGTAGTCTCAAAGGACTGCGCAGAATATCTGCTCAAGACCGCAAGGTTCATTGACGACCTGCTTGTAAAATATTATAAAGTCGATGCTTACTACAATATTAACAGCGCAGACGACCTCATTGGGAAACTGGTGATTGGGCTTGCGCCCCATACATCTGCTGGAGTGCTCGGGCGCCTTATCGGGTTCACAACTGCATCCGTGGGCTATGCGCATCCCTTTTTCCATGCAGCAAAGAGACGAAACTGCTTTCATGGAGATGAAAAATTATTGGTTTTCAAAGGAGATGGTTTTGAGCTTTTAACGATTCGCCAGCTTGTTGAACTCAGTCTTACCGGCAAAATAGAAAAAGATGATTTTGGAACCGAATACAAGGAGATACAAGGACTGAAAACGTTTGCTTTCAACACAAAAACGAAAAAATTCGAACTGGCGGAAATAACCCATGTTTCAAGGCACATTGCTCCTGAAAAACTGCTTGAAATAAAAACAAAAAGCGGTAGAAAGATAGTCGTGACTGAAGACCATCCGTTCCCGGATAAATCAGGAGTCAAAGTGAGGGCAGAGGATGTAGATGAATTATTGATCCCCTGGAATCTCAAAAGACCTACTATCGAAACTAAAGACAATATCGACCTGCTTTCGATAACCGAACCTGAAGACGTTATGATAAGAACTGAATGCGATGTTTTCGATGAGGATGTATCTTTTTCAGAGATAAGCAGCAATCTTGGAATGAGTTACAAGACATTTACAAATTATATTTACAGAAAGTCATATCCGTTTGAGATTGTCAAGAGATTTAATCCTGATATAATCGATGCAGGAAATTACCTGATAGGGAGCAGAAGAGATAAGGTTTCCATAAAGCCCAGCATAACTGTGGACGAAGATTTCTTATTACTGTTGGGATTTTATCTGGCTGAAGGGTTTATTAAGAAGAATCAAATAAATTGTCATCAGGTATCTATAACCGCTACTAAAGAATGGATAAGACGCTTATTAAAAGAAAAAATAAACGCTGTTTTTGGTTTGCACCCCAGTATTTCAGGAAACCATGTAACGATATGCTCAAGATTTGTTTATGAACTTTTTGAAGAACTGAAAATCGGTAAAGATGCGAAAACAAAAAGGGTTCCGAACTTTGTGTACGCCCTGCCAGAGGAAAAGATTAGCGCATTCTTGAGAGGTTATTTCACCGGAGATGGATCGTGTTCCCTGCAAAGCACGCTGGAGGTCAATGTGACTTCAGTAAATAAATGGCTGATAGACGCCGTTTCATTCCTTCTTATGTTTTCCGGAATTAAGCACTCTATTTATGAGGAAGAAAGAGCTGTAAAAAGCGACCTAATCCTAAAATTTTATGGAAAATCGAAGTTGATACATTCGTATAAGATAAGGATATATGGCAGCGAAGCAGGAAAATTCATAGAAGACGTAGGCTTCCTGGGTGAAAAGCAGGAGCATGCTGAAGAATTGCTTAAAAAATGGCTGGCTAAAAAAGGCAGGACAAGAACCAGTTTTGATGAAGATGTTTTCAGTGATAAAGTTATAGAAAAAAGAGAGATAAGCTCCCATGATAAATATGTGTATAATCTGACTGTCGATACCCATCACAGCCTCATTTGCTCAGGAATTACTGCCTTCCAGTGCGATGGCGACGAGGACTGCGTAATGCTGCTCATGGACGGGCTTTTGAATTTCTCGCGCTCGTACCTCCCGGACAAGCGCGGCGGGCAGATGGACGCGCCTCTTGTGCTCACCTCGCGCATCGACCCGAATGAGGTTGATAAGGAGGCGCATAATGTGGATTTGCTTTTCAGGTATCCGCTTTTGTTCTATGAAGCCACGCTGCAATACAAGAACCCGAAGGATATCGTGAAACTCATGGATACGGTGAGCGGGAGGCTCGGAACGCCGGCGCAGTACGAGGGTTTCGGCTTCACCCACGATACCGCAGATATCGCGGCAGGACCGAGGAACAGCGCCTACAAGACGCTCGGGACGATGATAGAGAAGATGGATGCACAGCTTGCCTTGGCACGGAGGATAAAGGCAGTTGACCCGCAGGATGTTGCCGAGCGTGTAATCGAATCGCATTTCCTGCCCGACCTTATCGGAAATTTGCGCTCGTTCTCAAAACAGAAGGTGAGATGCACGAAATGCAATGCTAAGTACAGGCGCCCGCCGCTTCGGGGCACGTGCCCGAAGTGCGGCGGGAATATCGTGCTTACGGTGCATGAGGGTTCGGTGAGGAAGTATCTTGAGACATCACTTCGGATTGCGGATGAGTATAATGTGCGGCATTATACGAAGCAGAGGCTTGAGTTACTGGAGCTTGAGATGAGGTCGCTTTTTGAGAGCGATAAGGTGAAGCAGAAGGGGCTTGCGGATTTTATGTGA
PROTEIN sequence
Length: 1611
MKFAASDAMLSYFNGLESELNRAIDLANRARANGADPTPSTEIPIAKDLADRVEKLIGVEGVAKRLRELESTMSREEASLQLGLEVASGKIKQFESQKDAIEAAVRVAMAVLTEGVVAAPIEGIAKIDLAKNDDGSDYIRIYYAGPIRSAGGTAQALSVLAADYIRGSLGINRFIPRAEEVERYVEEIAAYHRAVHLQYMPTDEEIRLIVRNCPICIDGEPTEEAEVEGRRDLARIETNRIRGGMALVIAEGIALKAPKVKKHVDKLKLPGWDFLEKFVVTVKTDDASAQLKPKDKYLQDLIAGRPVFSYPSRPGGFRLRYGRGRNTSFAAAGISPATMVMMDDFIAAGTQIKVERPGKAAGIAPVDTIEGPTVRLFNGDVLRVDTQAEALKIRPSVQRILDIGEILINFGDFLENNHPLVPSSYCYEWWLQELAAKIPLNEQGDLRNPDQKTALSLSDTYKVPLHPKYTYLWHDISLDEYTALAEYIQKNGKFAEKVEFPLDDTIKTILETLLVPHIVREKLIFIEEPLPLMRCLGLDANLKKTWASAESNIMDTVSKVSGITIRSRAPIRIGGRMGRPEKSDKREMKPAPHVLFPIGEAGGRRRSLKSARDYIDDTDNGGKNNNEFKTGLSVQTEKAGTIKVQIGERICPSCKTRTFKNRCTCGKSTHPLLKCQSCGIEVPKPVCPKCKKETTSVTELEIDFKSEYQQALDNVGERDNFDSIKGVIGLTSKNKTPEPLEKGILRAKHDIVMFKDGTVRYDLSDLPLTHIKPRELGISVQKLKELGYVNDTYGKPLVDENQVIELKVQDIVVSKDCAEYLLKTARFIDDLLVKYYKVDAYYNINSADDLIGKLVIGLAPHTSAGVLGRLIGFTTASVGYAHPFFHAAKRRNCFHGDEKLLVFKGDGFELLTIRQLVELSLTGKIEKDDFGTEYKEIQGLKTFAFNTKTKKFELAEITHVSRHIAPEKLLEIKTKSGRKIVVTEDHPFPDKSGVKVRAEDVDELLIPWNLKRPTIETKDNIDLLSITEPEDVMIRTECDVFDEDVSFSEISSNLGMSYKTFTNYIYRKSYPFEIVKRFNPDIIDAGNYLIGSRRDKVSIKPSITVDEDFLLLLGFYLAEGFIKKNQINCHQVSITATKEWIRRLLKEKINAVFGLHPSISGNHVTICSRFVYELFEELKIGKDAKTKRVPNFVYALPEEKISAFLRGYFTGDGSCSLQSTLEVNVTSVNKWLIDAVSFLLMFSGIKHSIYEEERAVKSDLILKFYGKSKLIHSYKIRIYGSEAGKFIEDVGFLGEKQEHAEELLKKWLAKKGRTRTSFDEDVFSDKVIEKREISSHDKYVYNLTVDTHHSLICSGITAFQCDGDEDCVMLLMDGLLNFSRSYLPDKRGGQMDAPLVLTSRIDPNEVDKEAHNVDLLFRYPLLFYEATLQYKNPKDIVKLMDTVSGRLGTPAQYEGFGFTHDTADIAAGPRNSAYKTLGTMIEKMDAQLALARRIKAVDPQDVAERVIESHFLPDLIGNLRSFSKQKVRCTKCNAKYRRPPLRGTCPKCGGNIVLTVHEGSVRKYLETSLRIADEYNVRHYTKQRLELLELEMRSLFESDKVKQKGLADFM*