ggKbase home page

SR-VP_26_10_2019_2_100cm_scaffold_5139_12

Organism: SR-VP_26_10_2019_2_100cm_Methanoperedens_44_46

near complete RP 28 / 55 MC: 5 BSCG 21 / 51 MC: 1 ASCG 32 / 38
Location: comp(9210..9665)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZR38_THELI similarity UNIREF
DB: UNIREF100
  • Identity: 40.0
  • Coverage: 145.0
  • Bit_score: 93
  • Evalue 1.30e-16
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 40.0
  • Coverage: 145.0
  • Bit_score: 93
  • Evalue 3.60e-17
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67 similarity UNIPROT
DB: UniProtKB
  • Identity: 75.7
  • Coverage: 148.0
  • Bit_score: 232
  • Evalue 3.20e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

BJP_08E140C01_10KDA_Methanosarcinales_43_67 → Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 456
ATGGACGAGACAGACAAGAAAATAATCGAACTGTTAAAACAGGACGGAAGAATGGATGATGTGGAGATAGCCCGAAAAATTGGGATTTCCCACGATACGGTTAAACGAAGAAGGAAAAAACTCGAAGAGGAGAGTTACATTAAAATCCAGGCCAATATCAATCCACGTAAGCTCGGATATAAATATGTCTTTATCTTAGGAATTACACTTGCACCAGGAAAAGATGTAAGAAAAATTGCAGAGAAACTGGCTTCCAAGAAAGAGTTCTTTTTTGTAGCGCTTTCGTTGGGCCCAACTCATTCCATAGTTGCTTCATGCTATGCCCAGGACCAGATAATTCTCAATAAACTGGTTGAAGAATTACGAACCTGGAAAGAGATAGAAAAAATTGAGACCAATATCATTTACGAAGTTTTGAAATCGGGATATCACGATATTCCACTGGTAACTATTTAA
PROTEIN sequence
Length: 152
MDETDKKIIELLKQDGRMDDVEIARKIGISHDTVKRRRKKLEEESYIKIQANINPRKLGYKYVFILGITLAPGKDVRKIAEKLASKKEFFFVALSLGPTHSIVASCYAQDQIILNKLVEELRTWKEIEKIETNIIYEVLKSGYHDIPLVTI*