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SR-VP_26_10_2019_2_100cm_scaffold_11006_10

Organism: SR-VP_26_10_2019_2_100cm_Methanoperedens_44_46

near complete RP 28 / 55 MC: 5 BSCG 21 / 51 MC: 1 ASCG 32 / 38
Location: comp(5746..6588)

Top 3 Functional Annotations

Value Algorithm Source
Exosome complex component Rrp4 n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B8W4_METTP similarity UNIREF
DB: UNIREF100
  • Identity: 58.1
  • Coverage: 217.0
  • Bit_score: 290
  • Evalue 1.30e-75
exosome complex RNA-binding protein Rrp4 similarity KEGG
DB: KEGG
  • Identity: 58.1
  • Coverage: 217.0
  • Bit_score: 290
  • Evalue 3.70e-76
Tax=RBG_16_Euryarchaeota_41_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.7
  • Coverage: 278.0
  • Bit_score: 411
  • Evalue 9.40e-112

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Taxonomy

Sequences

DNA sequence
Length: 843
ATGGATAAAAAATTAGTAATACCAGGCGAATTCCTTTCAGACGATGTAAATCTTGCTGATGAGGGCACATATGTGGAAGAAGGCAAAGTATTCTCATCGGTTTTCGGTATCGCATCGTTGAAAAACCATGTCAGGGTCGTCCCGCTTTCGGGTAAATATATACCAAGACCCGGCGACATGATAATAGGCATAATAACCGAAGTCTCGTTTTCGAACTGGATTGTGGATATTCGCTCGCCCTATGAGGGTTTACTGCACATATCCGAATTCCCGAGAAGAATAGATAACACGGATATGGCAAAATATCTCAAGGTCGGGGATGCAATAATTACCCTTGTTACGGATGTCGATCCAACCATGAAAGTGGAATTGACCCTTAACGACCAGAGGCTCAGGCAGATTAAAGAAGGACGCATCATCGATGTAACCCCTTCCAAGGTCCCGAGGTTAATCGGGAGGAGCGGTTCGATGATTGCAATGCTGAAAAATGAGACTAATTGCAATATCTTTATCGGCCAGAATGGAAGGGTATGGATTACAGGGAAAGATAAGGATCTTGAACTTGCGGTGAAAGCAATCCTCAAGATTGAAAGAGAATCCCATGTTTCCGGCCTGACTGACAGGCTCACCAGGTTTTTAAAAGAAGAAAAAGACAAAAAGGAGAAAAAACCCGGAAAAGAACACGAGGATAAGGAAGAAACAAGAACAGAAGAGAAGATAGAAGACAAGACAGAAGAAAATGTTGAAGCAGTAGAGGAAGAAAAACAGCCGGAAGAGCATGAAAAAGCAGAAGAAAAAAAGTCGGGAGGAATTCTTGACGAACTGCTTGGCGATGAAAAATAA
PROTEIN sequence
Length: 281
MDKKLVIPGEFLSDDVNLADEGTYVEEGKVFSSVFGIASLKNHVRVVPLSGKYIPRPGDMIIGIITEVSFSNWIVDIRSPYEGLLHISEFPRRIDNTDMAKYLKVGDAIITLVTDVDPTMKVELTLNDQRLRQIKEGRIIDVTPSKVPRLIGRSGSMIAMLKNETNCNIFIGQNGRVWITGKDKDLELAVKAILKIERESHVSGLTDRLTRFLKEEKDKKEKKPGKEHEDKEETRTEEKIEDKTEENVEAVEEEKQPEEHEKAEEKKSGGILDELLGDEK*