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SR-VP_26_10_2019_2_100cm_scaffold_2020_29

Organism: SR-VP_26_10_2019_2_100cm_Methanoperedens_43_60

partial RP 26 / 55 MC: 7 BSCG 21 / 51 MC: 2 ASCG 27 / 38 MC: 2
Location: comp(21904..22674)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.3
  • Coverage: 254.0
  • Bit_score: 416
  • Evalue 2.00e-113
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=RLME_METMA similarity UNIREF
DB: UNIREF100
  • Identity: 64.1
  • Coverage: 259.0
  • Bit_score: 345
  • Evalue 2.40e-92
ftsJ; methyltransferase similarity KEGG
DB: KEGG
  • Identity: 64.1
  • Coverage: 259.0
  • Bit_score: 345
  • Evalue 6.80e-93

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 771
ATGCCTCGTGATAGAAGGGATTATTTTTACAAAAAAGCCAAGGACGAAGGCTATCGTTCCAGAGCCGCTTTTAAACTGAAACAGATAAATGAGAAATTTAAAATTATTACGAAAGGGGATTCTGTAGTCGATCTCGGCGCCGCTCCGGGGGGCTGGCTCCAGGTCGCAAAGGAACTCTCGGGAGGAAAAGTCGTTGGCGTGGATATACTCCCGATCGAGAAGATGGAAGGCGTGGAAACAATAAAAGGGGATATCCGGCTTGATGTGACTGTTGAAAAAATCAGGGATAAAATTAAAAAAGAAGGCGCTGATGCAGTTATCTGCGATGCAGCGCCCAATCTCACGGGCAGCTGGAGCTACGACCATGCCCGTTCGATTGACCTTGCTACTTCTGCTCTTGAATGCGCAAGAAAAATATTAAAGCCTGGAGGAAAATTTGCAGTGAAAGTATTCCAGGGGGATTTATTTCCGGATTTCCTGGATAAGGTACGGCAGAGTTTTGTGAAAGTGAAAGCATTTTCCCCGGAGGCTTCCCGAAAACAGAGCGCCGAGATATATGTTATCGGAAGGGAATTGCTTTCAGGGGCGGTAAAAATAGGTGAGGAATATACAGTTACCATTGAGAACATAGGAGCCAATGGGGACGGGATAGCCAAAATTAATGATTTTGTTGTATTTATAAATAACGCAAAAAAAGGCGAGAAACTTAAGATAAGAATCCGTTTTATCAAACCCAATTTTGCTTTCGGGGAAAGAATTGAACAGGACTAA
PROTEIN sequence
Length: 257
MPRDRRDYFYKKAKDEGYRSRAAFKLKQINEKFKIITKGDSVVDLGAAPGGWLQVAKELSGGKVVGVDILPIEKMEGVETIKGDIRLDVTVEKIRDKIKKEGADAVICDAAPNLTGSWSYDHARSIDLATSALECARKILKPGGKFAVKVFQGDLFPDFLDKVRQSFVKVKAFSPEASRKQSAEIYVIGRELLSGAVKIGEEYTVTIENIGANGDGIAKINDFVVFINNAKKGEKLKIRIRFIKPNFAFGERIEQD*