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SR-VP_26_10_2019_2_90cm_scaffold_11250_6

Organism: SR-VP_26_10_2019_2_90cm_Methanoperedens_44_8

partial RP 10 / 55 BSCG 4 / 51 ASCG 3 / 38 MC: 1
Location: comp(4045..4317)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit L {ECO:0000256|HAMAP-Rule:MF_00261}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00261};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.5
  • Coverage: 89.0
  • Bit_score: 158
  • Evalue 2.70e-36
UPI0003D1C250 related cluster n=1 Tax=unknown RepID=UPI0003D1C250 similarity UNIREF
DB: UNIREF100
  • Identity: 57.8
  • Coverage: 90.0
  • Bit_score: 116
  • Evalue 1.10e-23
RNA polymerase dimerization similarity KEGG
DB: KEGG
  • Identity: 53.3
  • Coverage: 90.0
  • Bit_score: 109
  • Evalue 3.80e-22

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 273
ATGGAACTTACAATACTCAACAAGACAGAAAATGAAATAAATATAAGAGTGGCTGGGGAGACGCATACCCTGCTTAATGTGCTCAAGACTGCTTTGCTGAACAACAAACATGTTGAAATAGCAACGTATGACATAAAACATCCCACAATCAGCGAACCTGTGCTTTTTGTGAGGACGGACGGCGCTGACCCCATAGAAGTGATAACAAAAGCATCCAAGGAAATTACCAAGGAGTGCGACGAGTTTATTAAGCTTTTCAAGAAAAAAATATAG
PROTEIN sequence
Length: 91
MELTILNKTENEINIRVAGETHTLLNVLKTALLNNKHVEIATYDIKHPTISEPVLFVRTDGADPIEVITKASKEITKECDEFIKLFKKKI*