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SR-VP_26_10_2019_C_40cm_scaffold_384_5

Organism: SR-VP_26_10_2019_C_40cm_Methanoperedens_44_15

near complete RP 30 / 55 MC: 3 BSCG 27 / 51 ASCG 37 / 38 MC: 1
Location: comp(3622..4449)

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.2
  • Coverage: 269.0
  • Bit_score: 413
  • Evalue 1.40e-112
diaminopimelate epimerase (EC:5.1.1.7) similarity KEGG
DB: KEGG
  • Identity: 61.0
  • Coverage: 272.0
  • Bit_score: 331
  • Evalue 1.90e-88
Diaminopimelate epimerase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XNV8_METZD similarity UNIREF
DB: UNIREF100
  • Identity: 61.0
  • Coverage: 272.0
  • Bit_score: 331
  • Evalue 6.60e-88

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 828
ATGATCCATTTCACAAAACTTCATGGCAACGGGAACGATTTCATTCTGATAGACGAATACGATGGAGAGATCGTTTCTGAAAAGGCAGTTTTTGCACAGATATACTGCAATCGCAGATTCGGGATAGGGGGAGATGGTGTCCTGTATCTTGGAAGCTCGGATAAAGCCGACCTCAGGATGCGAATATTCAATTCAGATGGGACAGAGGCCGAGATGTGCGGAAATGGCATACGATGTCTTGTGAAATATGCGCTGGATGAAGGGTATATCAAAGAGAGGGCAACAGTTGAAACCGTTTGTGGGGTGCTTTCCATAAGTTCGCGGACTGAGGATAGAACATGGATCACCGTGGACATGGGCAAACCCCAGTTCGCCAGGGAAAAGATCCCGGCAAAAGGGAAAGGCGAGTTCCTTTTGTCCAAGATGCACGGGTTCGATGTCTCGGCTGTCAATACAGGTGTCCCGCATGCGGTAATTTTCGTGGATTCGCTTGACGACCAGCTGATCTCAAAAGCGCCGGAGATACGCTACGACCCCATTTTCCCGAAGGGGACGAATGTGAATTTCGTGCATGTGGATTCGCGCGATGAGATCACCATTCGCACTTATGAGCGCGGAGTGGAGGCTGAAACTTTCAGCTGCGGAACGGGTTCGGTAGCCAGTGCGGCAATGGCCCACAGGCTTGGCAAGACAGATGATAAGGTCAAGGTGAATACAAAGGGGGGGGAATTGAGAATCAGCCTGACGAATGAAGCAGCATTAATGGAGGGGAGCGCAGAGAGGGTATTTGAGGGTACAATAAATTTAAATCAGAATATCACTTATTAA
PROTEIN sequence
Length: 276
MIHFTKLHGNGNDFILIDEYDGEIVSEKAVFAQIYCNRRFGIGGDGVLYLGSSDKADLRMRIFNSDGTEAEMCGNGIRCLVKYALDEGYIKERATVETVCGVLSISSRTEDRTWITVDMGKPQFAREKIPAKGKGEFLLSKMHGFDVSAVNTGVPHAVIFVDSLDDQLISKAPEIRYDPIFPKGTNVNFVHVDSRDEITIRTYERGVEAETFSCGTGSVASAAMAHRLGKTDDKVKVNTKGGELRISLTNEAALMEGSAERVFEGTINLNQNITY*