ggKbase home page

SR-VP_26_10_2019_C_40cm_scaffold_384_14

Organism: SR-VP_26_10_2019_C_40cm_Methanoperedens_44_15

near complete RP 30 / 55 MC: 3 BSCG 27 / 51 ASCG 37 / 38 MC: 1
Location: comp(14548..15495)

Top 3 Functional Annotations

Value Algorithm Source
2-hydroxyglutaryl-CoA dehydratase D-component n=1 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S716_METSF similarity UNIREF
DB: UNIREF100
  • Identity: 50.2
  • Coverage: 309.0
  • Bit_score: 327
  • Evalue 8.40e-87
Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB {ECO:0000313|EMBL:KCZ72629.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.0
  • Coverage: 313.0
  • Bit_score: 507
  • Evalue 8.30e-141
2-hydroxyglutaryl-CoA dehydratase D-component similarity KEGG
DB: KEGG
  • Identity: 50.2
  • Coverage: 309.0
  • Bit_score: 327
  • Evalue 2.40e-87

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 948
ATGGGGATGCATGTGCCAAAAATCGGAATAACCGCACTTGTTCCTCCTGAATTGATATTTGCATCCGGCAACGAACCGCTGGATGTCAATAATGTCATTCCAGAATCCAGAAAACACCCGAAAAACAAGTTGTGCGCATGGACAGCGATATGGAAAGAGATGCTGGTCAATAGAGAGACCGCTATTGACTCCCTTATAGTGGTGGCAGGAGGTGACTGCCATAATGCCCTTGTGGACGGTCAGAAAGTGGCGATGAGCGGAATACCGACGCACTTTTTCTTCTACCCGTTCGACGGTGATCCCGTATTCATGGAATCGCAATTGAACAGGCTTACAGGGTTTCTTGGAGGCATGGAGTCTCCCGAAAAATTAAAAGATATTGCAGGACTTAAGAAACTGGGGAAAGAGATCGATTCGAAAAGATGCAGGGGAAAGATCGCATCAAAAGACGCTTTTAACATCTTGATTTCTTTTAGCGACCTTTCAGGTGATCTAAATAAGTTTAGAAGAGTTATCGAATCGGCGGACAAAACAACAATCCAGCAAAATAACCGGGTGGCACTGCTGGGAGTGCCCCCGATATACCATGATTTTCATGAAATTGCAGAAACACTTGGTATTTCCATCGTTTTTGATGAACTTCCCTATGAGTTCGTAAGGCATGGGGGAAATGATATTGGTGAGATTGCGCTCGATTATTGCGATTATACGTTTGCAAGACCGCTTGATTTCAGGATAGATTTTCTCCAAAAAGAACTGGAAAAAAGAAAAGTGGATGGAGTTGTACATTACACCCAGTTCGCATGCCATCATGTGCTTGAGGATGAGATTTTAAGAGCAGAACTGGACTATCCCGTATTGACCATACAGGGGGACCTTCCGGGTAATACCCCGGAACAGGTAAGACTGCGGCTTGAAGCATTCAGGGAGATGCTTGAGAAATTATGA
PROTEIN sequence
Length: 316
MGMHVPKIGITALVPPELIFASGNEPLDVNNVIPESRKHPKNKLCAWTAIWKEMLVNRETAIDSLIVVAGGDCHNALVDGQKVAMSGIPTHFFFYPFDGDPVFMESQLNRLTGFLGGMESPEKLKDIAGLKKLGKEIDSKRCRGKIASKDAFNILISFSDLSGDLNKFRRVIESADKTTIQQNNRVALLGVPPIYHDFHEIAETLGISIVFDELPYEFVRHGGNDIGEIALDYCDYTFARPLDFRIDFLQKELEKRKVDGVVHYTQFACHHVLEDEILRAELDYPVLTIQGDLPGNTPEQVRLRLEAFREMLEKL*