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SR-VP_26_10_2019_C_40cm_scaffold_6735_3

Organism: SR-VP_26_10_2019_C_40cm_Methanoperedens_44_15

near complete RP 30 / 55 MC: 3 BSCG 27 / 51 ASCG 37 / 38 MC: 1
Location: comp(2840..3481)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=RL1_METBU similarity UNIREF
DB: UNIREF100
  • Identity: 60.6
  • Coverage: 213.0
  • Bit_score: 279
  • Evalue 2.30e-72
rpl1P; 50S ribosomal protein L1P similarity KEGG
DB: KEGG
  • Identity: 60.6
  • Coverage: 213.0
  • Bit_score: 279
  • Evalue 6.50e-73
Tax=RBG_16_Euryarchaeota_41_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 83.1
  • Coverage: 213.0
  • Bit_score: 372
  • Evalue 3.70e-100

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Taxonomy

Sequences

DNA sequence
Length: 642
TTGGAACATGAAACGATAGTAACAGCTGTGAAACAGGCATTAGAAAAAGCTCCACAGCGTAAATTTTCAGAAAGTATTGACCTGGCGATCAATCTTAAAAATCTTGATATGAACCAGCCGCAGAACAGGTTCGACGAAGAGATCATCCTGCCGCACGGCGTGGGTAAACCGATCAAGATCGCGGTATTTGCAAAAGGTGAGACCGCCCAGAGGGCAAAAGCGGCAGGTGCTGATTATGTTTTTGATCCTGAGGAAATCAATGTGCTCGGAGAAGACAAAGCAAGGGCAAAAACCCTTGCCGAAGAAGTCAATTTTTTTATCTCAGAGTCGGCATACATGCCAATAATTGGTAAAACCCTTGGTCAGGTACTCGGTCCCAGGGGAAAAATGCCCATACCCCTGACCCCGGATAAGGATATTGTCCAGATAATCAACAAGTCAAAGAACTCAATTAAGGTGAGATCCAAGGATAAGATGACATTCCACATCTCGATCGGAAGAAAGGAAATGGACCCGGTGAAGGTATCGGAGAATGTCGAGGCTATAATAAATCGTATAGAGCACAAGTACGAACGCGGCCTATATAATGTTAAATCGGTGTATGTTAAAACGACCATGGGGCCATCAGTGAGGGTGATTTAA
PROTEIN sequence
Length: 214
LEHETIVTAVKQALEKAPQRKFSESIDLAINLKNLDMNQPQNRFDEEIILPHGVGKPIKIAVFAKGETAQRAKAAGADYVFDPEEINVLGEDKARAKTLAEEVNFFISESAYMPIIGKTLGQVLGPRGKMPIPLTPDKDIVQIINKSKNSIKVRSKDKMTFHISIGRKEMDPVKVSENVEAIINRIEHKYERGLYNVKSVYVKTTMGPSVRVI*