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SR-VP_26_10_2019_C_20cm_scaffold_3441_6

Organism: SR-VP_26_10_2019_C_20cm-73-Thermoproteota-372_1

near complete RP 22 / 55 MC: 3 BSCG 17 / 51 MC: 1 ASCG 34 / 38 MC: 1
Location: 4210..5670

Top 3 Functional Annotations

Value Algorithm Source
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.9
  • Coverage: 481.0
  • Bit_score: 675
  • Evalue 4.60e-191
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] id=5048716 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b similarity UNIREF
DB: UNIREF100
  • Identity: 64.2
  • Coverage: 481.0
  • Bit_score: 659
  • Evalue 2.40e-186
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 63.2
  • Coverage: 487.0
  • Bit_score: 637
  • Evalue 2.20e-180

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1461
ATGACAGAGATAAAGAACGTGAAGCAGGTCTCGGACGTCGTCTGGGAGATACCGACGTCATTCAAGGCAGGGATGAACGTCCCTGCCCGGATCTACGCCACCAAGAAGCTGCTCGAGGCGATGGACAACGGAGTGATCGAGCAGGTCACGAACGTCGCCATGCTCCCCGGGATCGTCAAGTTCTCCTACGCCATGGCGGACGCGCACTGGGGTTACGGCTTCCCGATTGGCGGCGTGGCGGCCTTCGACCCGGAGAAGGGCGTAATCTCCCCAGGAGGGATCGGGTTCGATATCAACTGCGGGATGAGGCTCGTCCGGACCAACCTCCGCCTCTCGGAGGTCAAGCCGAAGATCAAGGAGCTGGTGGATCTGCTCTTCCGCCTGGTGCCGACAGGCGTCGGCGTCAAAGGCTTCGTGAAGGTCAGCCATTCGCAGTTCGAAGAGGTCATGAAGTGGGGCGTGAAATGGTGCGCCGAGAACGGCTACGGCTGGGCGGACGACGTCGAGAAGGTGGAGGAGGGAGGATACATCAAGGGCGCCAACCCCGCGAAGGTCAGCCAGCAAGCTTCTAGCCGCGGGATAAGCCAGCTCGGGACCTTGGGCTCGGGCAACCACTACTGCGAGGTACAAGTGGTCGACCCCGAGAGGTTCTTCGATGCCGAGATGGGGAAGCGCTTCGGGCTCGTCCACGAGGACCAGGTGGTCGTGATGGTCCACTGCGGCAGCAGGGGGTTCGGCCATCAGATCGCCTCGGATTACTTGCGGGTCTTCGACGGGGCGATGAAGCGCTACGGGATATCGGTGAGGGACAGGGAGCTCGCGTGCGCGCCCTTCTCCTCCAAGGAAGGGGAGGACTACTACGGCGCCATGGCGTGCGCAGCGAACATGGCCTTCGCCAACCGGCAGGTGATAGTCCACAGGATTCGAGACGCATTCCAGCAGACCTTCCACAAGGACCCCGAGGCCCTTGACATGCAAATCATCTATGACGTCTGCCACAACATCGCCAAAGTGGAGAAGCACACGGTGGACGGAGGCTCGTCTAAGGACCTGCTGGTCCACAGGAAGGGCGCCACGAGGAGCTTCGGCCCGGGGCATCGCGACATCCCCCCGGCGTACCGAGAGCTCGGCCAGCCGGTGATAATAGGCGGGTCGATGGAAACCGGCTCCTACCTGCTCTTGGGGACGAAGAAGGCCATGGAAGAGACGTTCGGCTCCACCGCGCACGGCTCGGGAAGGACGATGTCGAGGACGGCAGCCAAGAAGCAGGTGAGCGGCGCGGACCTCCAGCGGAGGATGGAGAAACGCGGGATCTACGTCAAGGCCGCGACTATGGAGGGCCTCGCCGAGGAGGCGGGGATGGCCTACAAGGACATCTCAGAGGTCGTCGAGACGATGCACCTGGCAGGCATCTCCGTGAAGGTCGCGGCCCTCAGGCCCATTGGAAACATAAAGGGCTGA
PROTEIN sequence
Length: 487
MTEIKNVKQVSDVVWEIPTSFKAGMNVPARIYATKKLLEAMDNGVIEQVTNVAMLPGIVKFSYAMADAHWGYGFPIGGVAAFDPEKGVISPGGIGFDINCGMRLVRTNLRLSEVKPKIKELVDLLFRLVPTGVGVKGFVKVSHSQFEEVMKWGVKWCAENGYGWADDVEKVEEGGYIKGANPAKVSQQASSRGISQLGTLGSGNHYCEVQVVDPERFFDAEMGKRFGLVHEDQVVVMVHCGSRGFGHQIASDYLRVFDGAMKRYGISVRDRELACAPFSSKEGEDYYGAMACAANMAFANRQVIVHRIRDAFQQTFHKDPEALDMQIIYDVCHNIAKVEKHTVDGGSSKDLLVHRKGATRSFGPGHRDIPPAYRELGQPVIIGGSMETGSYLLLGTKKAMEETFGSTAHGSGRTMSRTAAKKQVSGADLQRRMEKRGIYVKAATMEGLAEEAGMAYKDISEVVETMHLAGISVKVAALRPIGNIKG*